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The map label for this gene is nusA

Identifier: 124027509

GI number: 124027509

Start: 603602

End: 604087

Strand: Direct

Name: nusA

Synonym: Hbut_0627

Alternate gene names: NA

Gene position: 603602-604087 (Clockwise)

Preceding gene: 124027505

Following gene: 124027513

Centisome position: 36.21

GC content: 51.44

Gene sequence:

>486_bases
TTGTGTCCCCGCTGCCAGAGCCTTATCGACACGGGTGCTGTTGAAGAGCGAGAAGTAGACATTATGAAGGTGCTAATAGA
GCTCGAGGAGAGTGAGGGTGTACAGCTACTAAAGAAGGCAACATACTACAAAACGTATTTCATAGACAACGACATGGTGA
TAATAGTAATGGATCTCGGCGTCGGCACCAGCGTCCCGATATTCACCAGGTATGCCAGGCAGGTAGAGCAGAAGCTAAGA
GAGAAGCTTGGCACCCGCGTAAAGATAATACCGAAGGCGAGCGATGTACGTGGCCTAGCAACACACCTCCTCTACCCTGC
AAGGGTGCTAGGAGTAAACACACTATGGCTGCCAGATGGCAGCATAGAGTACGTCGTAAGGATACCCCGCCGCGACGAGG
AAAGGCTCGGCAAGGCAAAGGAGCTCTATGAGCGTATACTAACAGAGCTTCTCGGGAAGAGAACGAGGATAAAGTCCGGC
TACTAG

Upstream 100 bases:

>100_bases
TCTGTCAATACAGCCCAAGACCCTCGAGGCATGTAAGATGGGGGGGTGGGGAGCCACGGTACAAATCCCGCTGGACTACG
TGTGTGTCAAGAGCGGCGTG

Downstream 100 bases:

>100_bases
CTGTCGCAGCTTTTGGCATGGAAAACTCCAATATGGATTTTTGAAATCACTAAATAATCACTAAATATTAGACGTAAATT
ATAGGATATTCGTAAGCTCC

Product: putative transcription elongation factor

Products: NA

Alternate protein names: Transcription Elongation Factor NusA; Transcription Elongation Factor; NusA-Like Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MCPRCQSLIDTGAVEEREVDIMKVLIELEESEGVQLLKKATYYKTYFIDNDMVIIVMDLGVGTSVPIFTRYARQVEQKLR
EKLGTRVKIIPKASDVRGLATHLLYPARVLGVNTLWLPDGSIEYVVRIPRRDEERLGKAKELYERILTELLGKRTRIKSG
Y

Sequences:

>Translated_161_residues
MCPRCQSLIDTGAVEEREVDIMKVLIELEESEGVQLLKKATYYKTYFIDNDMVIIVMDLGVGTSVPIFTRYARQVEQKLR
EKLGTRVKIIPKASDVRGLATHLLYPARVLGVNTLWLPDGSIEYVVRIPRRDEERLGKAKELYERILTELLGKRTRIKSG
Y
>Mature_161_residues
MCPRCQSLIDTGAVEEREVDIMKVLIELEESEGVQLLKKATYYKTYFIDNDMVIIVMDLGVGTSVPIFTRYARQVEQKLR
EKLGTRVKIIPKASDVRGLATHLLYPARVLGVNTLWLPDGSIEYVVRIPRRDEERLGKAKELYERILTELLGKRTRIKSG
Y

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18501; Mature: 18501

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPRCQSLIDTGAVEEREVDIMKVLIELEESEGVQLLKKATYYKTYFIDNDMVIIVMDLG
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEEEEEEECC
VGTSVPIFTRYARQVEQKLREKLGTRVKIIPKASDVRGLATHLLYPARVLGVNTLWLPDG
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCC
SIEYVVRIPRRDEERLGKAKELYERILTELLGKRTRIKSGY
CEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MCPRCQSLIDTGAVEEREVDIMKVLIELEESEGVQLLKKATYYKTYFIDNDMVIIVMDLG
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEEEEEEECC
VGTSVPIFTRYARQVEQKLREKLGTRVKIIPKASDVRGLATHLLYPARVLGVNTLWLPDG
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCC
SIEYVVRIPRRDEERLGKAKELYERILTELLGKRTRIKSGY
CEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA