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The map label for this gene is ydaO [C]

Identifier: 124027476

GI number: 124027476

Start: 559749

End: 560744

Strand: Reverse

Name: ydaO [C]

Synonym: Hbut_0591

Alternate gene names: 124027476

Gene position: 560744-559749 (Counterclockwise)

Preceding gene: 124027477

Following gene: 124027474

Centisome position: 33.63

GC content: 54.72

Gene sequence:

>996_bases
GTGTCCCGTGCTTCCGGGATGGCTTTCTGCGAGAAGCACTTCCTAGAGTACTTTGACAGGAAGGTCCGGAGGACCCTCCG
GCGCTACAAGCTGTTTGGCCCCGAGGAGAAGATTGTTGTTGCAGTGTCGGGCGGCAAGGATTCTATGTCGTTGCTCCACT
ATCTGCTCCGCCTCTCAAAGCGTGTGCCTGGCTGGAGGGTTGCAGCACTCCTAGTTGACGAGGGTATCCGCGGATACCGC
GAGTACACAATTGAGCGGTTCCTACGGTTCGTGGAGGAGCACGGCGTTGAGTATAGGATTGCACGGTTCCGGGACGAGTT
TGGCTACACCCTGGATGAGATAGTTAAGATTGGCAAGGAGCGGGGGCTTCCATATCTTCCATGCACGTACTGTGGCGTGT
TCCGCCGCTATCTTATGAACAAGACTGCAAGAGAGATGGGTGCTACCGTTGTAGCTACAGCACACAATCTCGACGACTTA
GTGCAAACCTACCTGATGAACGTGTTTAACAACGACTGGGACAAAATTGCGAGGCTCGGCCCAATCTCGGGGCCGGGTAC
GCATCCCAGGTTTGTCCGGAAGGTTAAGCCATTCTACGAAGTACTTGAGAAGGAAACAACTATCTACGCTGTAATCAACG
GGCTTTACACGGGCTTCGAGGAGTGTCCATATGCGAGGCTAAGTGTACGCTGGTATATCCGGAGAATGTTAAACGAGCTT
GAGGAGAGATCACCTGGTGTAAAGTACTCGCTGCTTCGCAGCCTCCAGACCGCCATAAGGATCCTTGAGGAGGCTGGAAG
GGTTAAGACAGGGGATGAGGAGGAGGGACCCTACACATGCGCCATTTGTGGCGAGCCCTCGGCCCACCCGATATGCCGTG
CCTGCCAGCTACGCTTAGAGCTCGGGATTCTGAAGCTTAGTGAGGAAAGACTGAGAAGCCTACCCGAGGCAGCTAGGCGC
ATGGCTCTAGAAGCTATGAACCGTTGGAGCCGCTAG

Upstream 100 bases:

>100_bases
GTAGCTGAGGATGAGCCTGTAGCTGATGGAGACGAGCTGATACTGTACCCGGTGGTGTCGGGTGGCTAGGTGCGCTATCT
GCGGGAGGCCCGCGATCTAT

Downstream 100 bases:

>100_bases
TTCCGGAGACCTTGCCCGTAACTGTTCTTTCAAGTTACCGCCTTAACCCTGGACGCCCACCACGTTGGTAAAAAGATGTA
GCCGCCATGTCTTTTGGCGA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSRASGMAFCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSKRVPGWRVAALLVDEGIRGYR
EYTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKERGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDL
VQTYLMNVFNNDWDKIARLGPISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWYIRRMLNEL
EERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQLRLELGILKLSEERLRSLPEAARR
MALEAMNRWSR

Sequences:

>Translated_331_residues
MSRASGMAFCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSKRVPGWRVAALLVDEGIRGYR
EYTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKERGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDL
VQTYLMNVFNNDWDKIARLGPISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWYIRRMLNEL
EERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQLRLELGILKLSEERLRSLPEAARR
MALEAMNRWSR
>Mature_330_residues
SRASGMAFCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSKRVPGWRVAALLVDEGIRGYRE
YTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKERGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDLV
QTYLMNVFNNDWDKIARLGPISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWYIRRMLNELE
ERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQLRLELGILKLSEERLRSLPEAARRM
ALEAMNRWSR

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=294, Percent_Identity=32.6530612244898, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1787606, Length=257, Percent_Identity=26.0700389105058, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17540090, Length=299, Percent_Identity=33.4448160535117, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI193211090, Length=252, Percent_Identity=26.1904761904762, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321227, Length=147, Percent_Identity=34.6938775510204, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651972, Length=298, Percent_Identity=33.5570469798658, Blast_Score=152, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 38474; Mature: 38343

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRASGMAFCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
RVPGWRVAALLVDEGIRGYREYTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
RGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDLVQTYLMNVFNNDWDKIARLG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
PISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWYIRRMLNEL
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQLRLE
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LGILKLSEERLRSLPEAARRMALEAMNRWSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRASGMAFCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYLLRLSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
RVPGWRVAALLVDEGIRGYREYTIERFLRFVEEHGVEYRIARFRDEFGYTLDEIVKIGKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
RGLPYLPCTYCGVFRRYLMNKTAREMGATVVATAHNLDDLVQTYLMNVFNNDWDKIARLG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
PISGPGTHPRFVRKVKPFYEVLEKETTIYAVINGLYTGFEECPYARLSVRWYIRRMLNEL
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EERSPGVKYSLLRSLQTAIRILEEAGRVKTGDEEEGPYTCAICGEPSAHPICRACQLRLE
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
LGILKLSEERLRSLPEAARRMALEAMNRWSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]