Click here to switch to the map view.

The map label for this gene is rps2P

Identifier: 124027420

GI number: 124027420

Start: 515264

End: 515914

Strand: Direct

Name: rps2P

Synonym: Hbut_0535

Alternate gene names: 124027420

Gene position: 515264-515914 (Clockwise)

Preceding gene: 124027419

Following gene: 124027421

Centisome position: 30.91

GC content: 53.15

Gene sequence:

>651_bases
ATGAGCCAGGAGTATGGGAGGCAGCAGGTAGAGATCGGGGGTAAGGTGGTAGAGCTACTCGTACCCCTTGAGCGTTACCT
CTCGGCGGGAGTCCACATAGGTACACACATTTGTACAGCATATATGAGGAAGTTTGTGTACAGGGTTAGGCCTGACGGGC
TCTACATCCTCGACATAAGGAAGACTGATGAGAGGCTAAGGGTGGCAGCAAAGTTCCTCGCTAGGTTTGAGCCCTCCAAG
ATAGTAGCGGTATCTGTGCGTCAGTACGGTCAGAGGCCTGTCCAGAAATTCTGCACATATATAGGCTGCAAGGCGATAAC
TGGCAGGATACTGCCTGGCACATTTACCAACCCGAGCCTAGAGTGGTACGTAGAGCCTGACGTCATAGTGGTCACGGACC
CGCGTGCTGATAGCCAGGCAGTGGATGAGGCCGCGCGCATGGGCATCCCTGTAGTAGCACTTACCGACACCGACAACCGT
GTAGAGAACATAGACCTTGTGATACCTGTCAACAACAAGGGTAGGAAGAGCCTAGCGCTAGTCTACTGGATACTCACCCG
TGAAATACTAAGAGAGCAGGGCAAGATACCGCAGGATCAGGATCTACCCGAGCCGCCGGAAGCATTTGAGTTCAAGGTTA
GGAGACACTAG

Upstream 100 bases:

>100_bases
ACTGGCTCACGTTCCAGCCATCTATGAGGTTCGCAAGTTTAAGCGTGTACTCTAGAGGTATAACCCCCCGTCCAGCTTGG
TGCGTGGAGGGGGCTAGAAG

Downstream 100 bases:

>100_bases
CATGGAACAGCGCTTCTCCCTAGCTAGTAGGCCGATACTTTCGCACAGCCGATTTGTAGTGCTCCTCCTTCTCTATTCCT
AGCTGGGTGAGGTGGCTAGT

Product: 30S ribosomal protein S2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSQEYGRQQVEIGGKVVELLVPLERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLARFEPSK
IVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSLEWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNR
VENIDLVIPVNNKGRKSLALVYWILTREILREQGKIPQDQDLPEPPEAFEFKVRRH

Sequences:

>Translated_216_residues
MSQEYGRQQVEIGGKVVELLVPLERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLARFEPSK
IVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSLEWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNR
VENIDLVIPVNNKGRKSLALVYWILTREILREQGKIPQDQDLPEPPEAFEFKVRRH
>Mature_215_residues
SQEYGRQQVEIGGKVVELLVPLERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIRKTDERLRVAAKFLARFEPSKI
VAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSLEWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRV
ENIDLVIPVNNKGRKSLALVYWILTREILREQGKIPQDQDLPEPPEAFEFKVRRH

Specific function: Unknown

COG id: COG0052

COG function: function code J; Ribosomal protein S2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S2P family

Homologues:

Organism=Homo sapiens, GI9845502, Length=177, Percent_Identity=40.1129943502825, Blast_Score=153, Evalue=1e-37,
Organism=Homo sapiens, GI59859885, Length=177, Percent_Identity=40.1129943502825, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17554768, Length=173, Percent_Identity=41.0404624277457, Blast_Score=136, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6323077, Length=171, Percent_Identity=42.1052631578947, Blast_Score=156, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6321653, Length=171, Percent_Identity=41.5204678362573, Blast_Score=156, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24639112, Length=182, Percent_Identity=40.6593406593407, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI17136518, Length=182, Percent_Identity=40.6593406593407, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI45551198, Length=191, Percent_Identity=39.2670157068063, Blast_Score=144, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS2_HYPBU (A2BK84)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001012740.1
- ProteinModelPortal:   A2BK84
- SMR:   A2BK84
- STRING:   A2BK84
- GeneID:   4782383
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0535
- eggNOG:   arNOG08216
- HOGENOM:   HBG736296
- OMA:   KKFIYRV
- PhylomeDB:   A2BK84
- ProtClustDB:   PRK04020
- BioCyc:   HBUT415426:HBUT_0535-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00291_A
- InterPro:   IPR001865
- InterPro:   IPR018130
- InterPro:   IPR005707
- PANTHER:   PTHR11489
- PRINTS:   PR00395
- TIGRFAMs:   TIGR01012

Pfam domain/function: PF00318 Ribosomal_S2; SSF52313 Ribosomal_S2

EC number: NA

Molecular weight: Translated: 24639; Mature: 24508

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00962 RIBOSOMAL_S2_1; PS00963 RIBOSOMAL_S2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEYGRQQVEIGGKVVELLVPLERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIR
CCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEC
KTDERLRVAAKFLARFEPSKIVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSL
CCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
EWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRVENIDLVIPVNNKGRKSLAL
EEEECCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHH
VYWILTREILREQGKIPQDQDLPEPPEAFEFKVRRH
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEECC
>Mature Secondary Structure 
SQEYGRQQVEIGGKVVELLVPLERYLSAGVHIGTHICTAYMRKFVYRVRPDGLYILDIR
CCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEC
KTDERLRVAAKFLARFEPSKIVAVSVRQYGQRPVQKFCTYIGCKAITGRILPGTFTNPSL
CCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
EWYVEPDVIVVTDPRADSQAVDEAARMGIPVVALTDTDNRVENIDLVIPVNNKGRKSLAL
EEEECCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHH
VYWILTREILREQGKIPQDQDLPEPPEAFEFKVRRH
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA