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The map label for this gene is 124027366

Identifier: 124027366

GI number: 124027366

Start: 456405

End: 457043

Strand: Reverse

Name: 124027366

Synonym: Hbut_0479

Alternate gene names: NA

Gene position: 457043-456405 (Counterclockwise)

Preceding gene: 124027367

Following gene: 124027365

Centisome position: 27.41

GC content: 51.8

Gene sequence:

>639_bases
GTGCCGGAGCTTGCAAACTTTGACCCGCAGAGACTGGCTGAGAAGTTTAGGGCTATACTATCAGAAATCAATACAGTGCT
TTCTAGACGTGAGGAGCTGAGGGACTCGCTGATAAAGCTTGGCCGGGATGTGATCAAACTCTCCGGCTGGGCGATTAACG
CTCTGCACCGGGGCCGAGTCGAGGAAGCTAGGAAGTATATTGAGGAGATGGACTCGATAGTTTCAAGGTTTAGGGAGATG
GCTAAGTCTGACAGTTTCCTGGCTGAGAGCGGCTTTGTGTACAATGTATTGTCCGAGTATGTCGAGGCCAAGGTATTCTA
CTCGGTAGTCGTTGAGGGGGTCATACCTAGCCATAGGGAGCTTAGTGTACCCGAGGTACCGTACCTCCAGGGTGTGGGGG
ATGTGCTTGGGGAGCTTAGGAGGCTAGCACTAGACTACATGAGGCTCGGAAGACTCAACGAAGCAGAGAAAGTACTAGAC
CTCATGGAGGCTATGTACTATGAAATGCGTGCACTAGAGTATCCTGATGCCCTGCTACCTGGAGTCAGACACAAGGTTGA
TGTGGCGCGTCGCCTAATAGATGACACGAAATCCCTCCTCCTCAGTGTGAGGGCTAGAACGGGCTACGGTGCATCATAA

Upstream 100 bases:

>100_bases
GGTGCTGTATCGACTGGCTAAGTGTGCTCCGTGAGGAAGAGCTTAGCAGGCTTATTTCCAGTCTAGAGGAACTAGGAGGA
GAGGTGGGTAGCCGGTGAGT

Downstream 100 bases:

>100_bases
TGACCGGCTGGCAGCGAATGGATCCGGTAGAGGCGTTTCTCCTAACGCTATGCAGGTATCTCCGGGATCGCGGAGAGATG
GTTCTAGGTATGGCCCGGGC

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPELANFDPQRLAEKFRAILSEINTVLSRREELRDSLIKLGRDVIKLSGWAINALHRGRVEEARKYIEEMDSIVSRFREM
AKSDSFLAESGFVYNVLSEYVEAKVFYSVVVEGVIPSHRELSVPEVPYLQGVGDVLGELRRLALDYMRLGRLNEAEKVLD
LMEAMYYEMRALEYPDALLPGVRHKVDVARRLIDDTKSLLLSVRARTGYGAS

Sequences:

>Translated_212_residues
MPELANFDPQRLAEKFRAILSEINTVLSRREELRDSLIKLGRDVIKLSGWAINALHRGRVEEARKYIEEMDSIVSRFREM
AKSDSFLAESGFVYNVLSEYVEAKVFYSVVVEGVIPSHRELSVPEVPYLQGVGDVLGELRRLALDYMRLGRLNEAEKVLD
LMEAMYYEMRALEYPDALLPGVRHKVDVARRLIDDTKSLLLSVRARTGYGAS
>Mature_211_residues
PELANFDPQRLAEKFRAILSEINTVLSRREELRDSLIKLGRDVIKLSGWAINALHRGRVEEARKYIEEMDSIVSRFREMA
KSDSFLAESGFVYNVLSEYVEAKVFYSVVVEGVIPSHRELSVPEVPYLQGVGDVLGELRRLALDYMRLGRLNEAEKVLDL
MEAMYYEMRALEYPDALLPGVRHKVDVARRLIDDTKSLLLSVRARTGYGAS

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 24225; Mature: 24094

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELANFDPQRLAEKFRAILSEINTVLSRREELRDSLIKLGRDVIKLSGWAINALHRGRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH
EEARKYIEEMDSIVSRFREMAKSDSFLAESGFVYNVLSEYVEAKVFYSVVVEGVIPSHRE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LSVPEVPYLQGVGDVLGELRRLALDYMRLGRLNEAEKVLDLMEAMYYEMRALEYPDALLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
GVRHKVDVARRLIDDTKSLLLSVRARTGYGAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PELANFDPQRLAEKFRAILSEINTVLSRREELRDSLIKLGRDVIKLSGWAINALHRGRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH
EEARKYIEEMDSIVSRFREMAKSDSFLAESGFVYNVLSEYVEAKVFYSVVVEGVIPSHRE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LSVPEVPYLQGVGDVLGELRRLALDYMRLGRLNEAEKVLDLMEAMYYEMRALEYPDALLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
GVRHKVDVARRLIDDTKSLLLSVRARTGYGAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]