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The map label for this gene is 124027348

Identifier: 124027348

GI number: 124027348

Start: 440930

End: 441280

Strand: Direct

Name: 124027348

Synonym: Hbut_0457

Alternate gene names: NA

Gene position: 440930-441280 (Clockwise)

Preceding gene: 124027343

Following gene: 124027349

Centisome position: 26.45

GC content: 56.98

Gene sequence:

>351_bases
TTGAGAAGGTTGGGCACCGTGCTACATACAACACCGAACGGATACATAGTGGTGAAGCTAGAGGAACAGCAGCCACCGCC
ACTCAATGTTAGGGTGTATGACAGGGATCTAAGGCCCATAGGCGTGCTACTCGACATCATAGGCCCTGTAAAGGAGCCCT
ATGCCGTGGTTAAGCCCGCGAGTAGGGAGATCAAGCTGGCTAGTGGCGAAGTGGTATACTATAAGCCGCCTAGGCCACAG
AAGAGAGGCAGGAGGCCGCGCAAAACGAGAACTCCAAGACAACACCGTGGTAGACAGGCTGGCCGGAGGGGTGGCGGGGG
TGGTAGGGGGAGGGGAGGTAGGAGGAGATGA

Upstream 100 bases:

>100_bases
TTGAGCCTCCCCGCTTATACGCTGGACTACACTGCAATACCATGTGTATAGGAGTAATAATAGGAGCACCCCGCCACCCC
CCTAGCTAGGGATCCATGCT

Downstream 100 bases:

>100_bases
GTATACCTCTACCCAAGGGTCTGGAATATTGTCCCGTGTGTAAGGCGCCCCTAAAGCTCTACGCTAAACGTGATGGGAGT
AAGCTAGTCTGCACCAACTG

Product: RNA binding protein, Gar1-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRRLGTVLHTTPNGYIVVKLEEQQPPPLNVRVYDRDLRPIGVLLDIIGPVKEPYAVVKPASREIKLASGEVVYYKPPRPQ
KRGRRPRKTRTPRQHRGRQAGRRGGGGGRGRGGRRR

Sequences:

>Translated_116_residues
MRRLGTVLHTTPNGYIVVKLEEQQPPPLNVRVYDRDLRPIGVLLDIIGPVKEPYAVVKPASREIKLASGEVVYYKPPRPQ
KRGRRPRKTRTPRQHRGRQAGRRGGGGGRGRGGRRR
>Mature_116_residues
MRRLGTVLHTTPNGYIVVKLEEQQPPPLNVRVYDRDLRPIGVLLDIIGPVKEPYAVVKPASREIKLASGEVVYYKPPRPQ
KRGRRPRKTRTPRQHRGRQAGRRGGGGGRGRGGRRR

Specific function: Unknown

COG id: COG3277

COG function: function code J; RNA-binding protein involved in rRNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13134; Mature: 13134

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLGTVLHTTPNGYIVVKLEEQQPPPLNVRVYDRDLRPIGVLLDIIGPVKEPYAVVKPA
CCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCC
SREIKLASGEVVYYKPPRPQKRGRRPRKTRTPRQHRGRQAGRRGGGGGRGRGGRRR
CCEEEECCCCEEEECCCCCHHHCCCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLGTVLHTTPNGYIVVKLEEQQPPPLNVRVYDRDLRPIGVLLDIIGPVKEPYAVVKPA
CCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCC
SREIKLASGEVVYYKPPRPQKRGRRPRKTRTPRQHRGRQAGRRGGGGGRGRGGRRR
CCEEEECCCCEEEECCCCCHHHCCCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA