Click here to switch to the map view.

The map label for this gene is 124027347

Identifier: 124027347

GI number: 124027347

Start: 440185

End: 440802

Strand: Reverse

Name: 124027347

Synonym: Hbut_0456

Alternate gene names: NA

Gene position: 440802-440185 (Counterclockwise)

Preceding gene: 124027351

Following gene: 124027346

Centisome position: 26.44

GC content: 51.94

Gene sequence:

>618_bases
TTGATTCAAATCGCCGTGGTGGGATGTGGTAGTACGGGATTATTCCTTGCAGCTGGGCTAGCAGCCTCCGGCTACAAGCC
CATCCTCTTCTGTAGCCACGATGAGGCGGTTGCTGCAATAGCAGCTAATGGTATTAGAGTTGTTGGACATGGCGAGGCCT
ATGCAAGGGTTTCAGCAGCGCATGTCAGTCTCGCTCAGCCACAGTATAAGCTAGCATTCCTGGCATTTCGCCTTAATGGG
CTCCGGGAAGGGCTGAAAGTGGCTAGCCAGCTTCTTTCAAGCGATGCTCTTGGAATCGTTTTGCTGCAACCTTCACCCTT
GGCTCTCGAGGAGGCAGAGAGTGCTGGATTTCCTATTGCGGGGTTTCTACACCTCGGCACTTGTGTGTGGAAGATAACTA
GTTCAACAGTTGAATGGAGTGGTAACGGATTTGCAGTCTTTGCAGGGCTTAACGATGCAGGTCGTGTTGTGATGGACATC
GCAAAGGTATACAGGCTAGATGCTAGGCTTTATGGCTCCGAGAAAATCGGATCAGTTGCCTGGGATGCGTTGTCAGTGGC
AGCCTCGGTGCAGCCTGTATCAGCCTTACTAGGTGGTTGCAGTATCAAGGCTCGCTAG

Upstream 100 bases:

>100_bases
CGGGGTGCTCCTATTATTACTCCTATACACATGGTATTGCAGTGTAGTCCAGCGTATAAGCGGGGAGGCTCAAGATCCCA
GCATAGGGTGTTGGCCTGCA

Downstream 100 bases:

>100_bases
GTCTAGCTATGCTATGCAGCTAGTGGAGTCCCTTGCAGGCGAGGTTGAGCTTGTAGCTGAGAAGCTTGGCATACAACTTC
TACGAAGACCAGTTGAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIQIAVVGCGSTGLFLAAGLAASGYKPILFCSHDEAVAAIAANGIRVVGHGEAYARVSAAHVSLAQPQYKLAFLAFRLNG
LREGLKVASQLLSSDALGIVLLQPSPLALEEAESAGFPIAGFLHLGTCVWKITSSTVEWSGNGFAVFAGLNDAGRVVMDI
AKVYRLDARLYGSEKIGSVAWDALSVAASVQPVSALLGGCSIKAR

Sequences:

>Translated_205_residues
MIQIAVVGCGSTGLFLAAGLAASGYKPILFCSHDEAVAAIAANGIRVVGHGEAYARVSAAHVSLAQPQYKLAFLAFRLNG
LREGLKVASQLLSSDALGIVLLQPSPLALEEAESAGFPIAGFLHLGTCVWKITSSTVEWSGNGFAVFAGLNDAGRVVMDI
AKVYRLDARLYGSEKIGSVAWDALSVAASVQPVSALLGGCSIKAR
>Mature_205_residues
MIQIAVVGCGSTGLFLAAGLAASGYKPILFCSHDEAVAAIAANGIRVVGHGEAYARVSAAHVSLAQPQYKLAFLAFRLNG
LREGLKVASQLLSSDALGIVLLQPSPLALEEAESAGFPIAGFLHLGTCVWKITSSTVEWSGNGFAVFAGLNDAGRVVMDI
AKVYRLDARLYGSEKIGSVAWDALSVAASVQPVSALLGGCSIKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21160; Mature: 21160

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIAVVGCGSTGLFLAAGLAASGYKPILFCSHDEAVAAIAANGIRVVGHGEAYARVSAA
CEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEECCCHHEEEEEH
HVSLAQPQYKLAFLAFRLNGLREGLKVASQLLSSDALGIVLLQPSPLALEEAESAGFPIA
HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCEE
GFLHLGTCVWKITSSTVEWSGNGFAVFAGLNDAGRVVMDIAKVYRLDARLYGSEKIGSVA
HHHHHHHEEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH
WDALSVAASVQPVSALLGGCSIKAR
HHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MIQIAVVGCGSTGLFLAAGLAASGYKPILFCSHDEAVAAIAANGIRVVGHGEAYARVSAA
CEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEECCCHHEEEEEH
HVSLAQPQYKLAFLAFRLNGLREGLKVASQLLSSDALGIVLLQPSPLALEEAESAGFPIA
HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCEE
GFLHLGTCVWKITSSTVEWSGNGFAVFAGLNDAGRVVMDIAKVYRLDARLYGSEKIGSVA
HHHHHHHEEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH
WDALSVAASVQPVSALLGGCSIKAR
HHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA