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The map label for this gene is 124027302

Identifier: 124027302

GI number: 124027302

Start: 400057

End: 401490

Strand: Direct

Name: 124027302

Synonym: Hbut_0411

Alternate gene names: NA

Gene position: 400057-401490 (Clockwise)

Preceding gene: 124027299

Following gene: 124027305

Centisome position: 24.0

GC content: 51.67

Gene sequence:

>1434_bases
GTGCCGTGTGGAGCCTGGTGGTGTAGCCCTCTACGCGGCCGATTTACGAGAGAACTACCGCTAGCCGTTGAGGGGCCTGG
CGGTCCCGCGCCAGAGACGCCCCTGGCAACATACGCTATTATAGCTATTAACGTACTCGTCTACCTCGTAACTTCCGCTC
CGACAGGATTCTGGCAGACAACCGATGAATGGGTCTCCAGGCTAGGCTTTGTCCCAGCAGCACTCCTCGCTACACCCCCA
TCAGAGTTCCCCAGGATACTAACAGCGATGTTTACCCATGCAAACCTCATACACATATTCTTCAACATGTACTTCCTCTA
CCTCTTCGGCCGCGCCGTGGAGAAGACCCTCGGACACTGGAGGTACCTAGCACTATACCTTGTAAGCGGCATCGTAGCAG
CTGTCTTCCACACAGTGTTCATGTACGTGGTGAATCCGGCTGGCCTAGCAATACCCAGCGTAGGCGCCAGCGGCGCTATA
AGCGGGGTCCTCGGGGCATACATGCTGCTATATCCGGGTACAAGGCTCACCGCATGCTTCTTCCTTGGCTTCATACCGTT
CTGCTTTGCACTACCAGCAGTCTACTACCTGCTCTTCTGGTTTGCAATGCAGGTCTACATGGGTTACACTCTTGCCGCAA
GTGCTGTAGCATTCTTTGCCCACGCGGGAGGCTTCGTATCTGGCATGGCCATCTTGCCACTCGTAGCTAGTAGGACTAGG
ATACTGTTGCTACGCATGCAGGCTGCTACGAGGAGCTTGTTTGGCCTGATAGTATTCTACTCGCCCTTCTTCTATCGTGG
CCGTGAGCTAAACCCTCTGGTCAAGAGTGTCCTGGCGATGCTTATACTTATGCTGCTAGCAGGCTCGGCATACGCTATAG
TTGATGCAAGAACCGAGGACAGCTATGTTGCAAGCTACCAGGTTAGGGCTAAGCTTAAGCTCGGCGATGAAGCCTATAGC
CTTGTAGACAGTTTCTTCATAAGAATCTACGGTGGAAAGGGTACGCTAATGCTAAAGGCTACCCTAACAAGCTACGGGAC
TGCAATTGCTGAGATCCTGGCACGCAACAATCTAGTCTATAACCCATCTCTAGCAAACCAAGAACTAGTACTAGACAAGG
GGCTCATCGGCATCGATATACGCCAAATACTGGGCTACAACATTGTCTCGGTTAGTATACAACCAAAACATTTCCACGGA
GTATACAACAAGGATGGCTACCTTGAAAAGGGCGAATTATACGCAAGTCTAGCGTATAGAAGGCTCATAGGCTCAATGAT
TATTGGAGAGCTAGCTGCTACTATAGGTCTTGCTGGAGCTGGAGCTGTAGGGCCAGCTATCCTCGCGCTGGCTATAGCTT
CTCTAGCCATGCTGGCTACAAGCCTCTACACAGTGTTATTCCTTGATAGGGAGCTAGTGATAACCCCCGAGTAA

Upstream 100 bases:

>100_bases
CCATTAGTTTTGTCAGCGTTCCTGGGGGTATTTATAAGAGCCTCTTACATTAACACACTGCTACCCGCGAAAGCCTAAGA
AGGTCATGGGCGTGATGTTG

Downstream 100 bases:

>100_bases
CACTAGCACAAAATACTGGAGTGATGAGGGCCGTGAACCCTTACCGCCGCCTAGGGCCGGGATGGGGAGGTGTTTCAAGG
CTGACTCTTCTCTTGCTCCT

Product: uncharacterized membrane protein

Products: NA

Alternate protein names: Peptidase; Integral Membrane Protein; Rhomboid-Like Protein; S54 Family Peptidase; Rhomboid Family Membrane Protein; Membrane-Associated Serine Protease; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Rhomboid Protein; Subfamily; Rhomboid Serine Protease; Membrane-Associated Protein; Integral Membrane Protein Rhomboid-Like Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Serine Protease; Regulatory Proteins IclR

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MPCGAWWCSPLRGRFTRELPLAVEGPGGPAPETPLATYAIIAINVLVYLVTSAPTGFWQTTDEWVSRLGFVPAALLATPP
SEFPRILTAMFTHANLIHIFFNMYFLYLFGRAVEKTLGHWRYLALYLVSGIVAAVFHTVFMYVVNPAGLAIPSVGASGAI
SGVLGAYMLLYPGTRLTACFFLGFIPFCFALPAVYYLLFWFAMQVYMGYTLAASAVAFFAHAGGFVSGMAILPLVASRTR
ILLLRMQAATRSLFGLIVFYSPFFYRGRELNPLVKSVLAMLILMLLAGSAYAIVDARTEDSYVASYQVRAKLKLGDEAYS
LVDSFFIRIYGGKGTLMLKATLTSYGTAIAEILARNNLVYNPSLANQELVLDKGLIGIDIRQILGYNIVSVSIQPKHFHG
VYNKDGYLEKGELYASLAYRRLIGSMIIGELAATIGLAGAGAVGPAILALAIASLAMLATSLYTVLFLDRELVITPE

Sequences:

>Translated_477_residues
MPCGAWWCSPLRGRFTRELPLAVEGPGGPAPETPLATYAIIAINVLVYLVTSAPTGFWQTTDEWVSRLGFVPAALLATPP
SEFPRILTAMFTHANLIHIFFNMYFLYLFGRAVEKTLGHWRYLALYLVSGIVAAVFHTVFMYVVNPAGLAIPSVGASGAI
SGVLGAYMLLYPGTRLTACFFLGFIPFCFALPAVYYLLFWFAMQVYMGYTLAASAVAFFAHAGGFVSGMAILPLVASRTR
ILLLRMQAATRSLFGLIVFYSPFFYRGRELNPLVKSVLAMLILMLLAGSAYAIVDARTEDSYVASYQVRAKLKLGDEAYS
LVDSFFIRIYGGKGTLMLKATLTSYGTAIAEILARNNLVYNPSLANQELVLDKGLIGIDIRQILGYNIVSVSIQPKHFHG
VYNKDGYLEKGELYASLAYRRLIGSMIIGELAATIGLAGAGAVGPAILALAIASLAMLATSLYTVLFLDRELVITPE
>Mature_476_residues
PCGAWWCSPLRGRFTRELPLAVEGPGGPAPETPLATYAIIAINVLVYLVTSAPTGFWQTTDEWVSRLGFVPAALLATPPS
EFPRILTAMFTHANLIHIFFNMYFLYLFGRAVEKTLGHWRYLALYLVSGIVAAVFHTVFMYVVNPAGLAIPSVGASGAIS
GVLGAYMLLYPGTRLTACFFLGFIPFCFALPAVYYLLFWFAMQVYMGYTLAASAVAFFAHAGGFVSGMAILPLVASRTRI
LLLRMQAATRSLFGLIVFYSPFFYRGRELNPLVKSVLAMLILMLLAGSAYAIVDARTEDSYVASYQVRAKLKLGDEAYSL
VDSFFIRIYGGKGTLMLKATLTSYGTAIAEILARNNLVYNPSLANQELVLDKGLIGIDIRQILGYNIVSVSIQPKHFHGV
YNKDGYLEKGELYASLAYRRLIGSMIIGELAATIGLAGAGAVGPAILALAIASLAMLATSLYTVLFLDRELVITPE

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51925; Mature: 51794

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCGAWWCSPLRGRFTRELPLAVEGPGGPAPETPLATYAIIAINVLVYLVTSAPTGFWQT
CCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
TDEWVSRLGFVPAALLATPPSEFPRILTAMFTHANLIHIFFNMYFLYLFGRAVEKTLGHW
HHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLALYLVSGIVAAVFHTVFMYVVNPAGLAIPSVGASGAISGVLGAYMLLYPGTRLTACF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
FLGFIPFCFALPAVYYLLFWFAMQVYMGYTLAASAVAFFAHAGGFVSGMAILPLVASRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHH
ILLLRMQAATRSLFGLIVFYSPFFYRGRELNPLVKSVLAMLILMLLAGSAYAIVDARTED
HEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SYVASYQVRAKLKLGDEAYSLVDSFFIRIYGGKGTLMLKATLTSYGTAIAEILARNNLVY
CEEEEEEEEEEEEECHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHCCCEEE
NPSLANQELVLDKGLIGIDIRQILGYNIVSVSIQPKHFHGVYNKDGYLEKGELYASLAYR
CCCCCCCCEECCCCCCCEEHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHH
RLIGSMIIGELAATIGLAGAGAVGPAILALAIASLAMLATSLYTVLFLDRELVITPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure 
PCGAWWCSPLRGRFTRELPLAVEGPGGPAPETPLATYAIIAINVLVYLVTSAPTGFWQT
CCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
TDEWVSRLGFVPAALLATPPSEFPRILTAMFTHANLIHIFFNMYFLYLFGRAVEKTLGHW
HHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLALYLVSGIVAAVFHTVFMYVVNPAGLAIPSVGASGAISGVLGAYMLLYPGTRLTACF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
FLGFIPFCFALPAVYYLLFWFAMQVYMGYTLAASAVAFFAHAGGFVSGMAILPLVASRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHH
ILLLRMQAATRSLFGLIVFYSPFFYRGRELNPLVKSVLAMLILMLLAGSAYAIVDARTED
HEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SYVASYQVRAKLKLGDEAYSLVDSFFIRIYGGKGTLMLKATLTSYGTAIAEILARNNLVY
CEEEEEEEEEEEEECHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHCCCEEE
NPSLANQELVLDKGLIGIDIRQILGYNIVSVSIQPKHFHGVYNKDGYLEKGELYASLAYR
CCCCCCCCEECCCCCCCEEHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCHHHHHHHHHH
RLIGSMIIGELAATIGLAGAGAVGPAILALAIASLAMLATSLYTVLFLDRELVITPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA