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The map label for this gene is rpl12p [H]

Identifier: 124027292

GI number: 124027292

Start: 385628

End: 386011

Strand: Direct

Name: rpl12p [H]

Synonym: Hbut_0400

Alternate gene names: 124027292

Gene position: 385628-386011 (Clockwise)

Preceding gene: 124027291

Following gene: 124027296

Centisome position: 23.13

GC content: 57.03

Gene sequence:

>384_bases
GTGTCTAGCCAGCGGCCGGGTAGGGAAGGAAGAGCTGAGTGGAGGCTGGCAGGCATGGAGTACATATATGCTAGCCTCGT
GCTCTACGCAGCTGGCAAAGAGATAAACGAGGAGAACCTAAAGAAGATCCTGGAGGCCGCAGGCATACAGGTGGACGAGG
CTCGTGTTAAGGCCGTTGTTGCAGCACTAAAGAACATCAACATAGACGAGGTCATAAAGTCTGCAACAGCAATGCCCGTA
GCTCCGGCTGCCGCTCCGGCCCCGGCTGCACCCGCCGCTGCTGAGGAGAAGAAAGAGGAAGAGAAGGAGGAAGAGGAGAA
GAAGAAGGAAGAGGTCAGCGAGGAGCAGCTCGCAGCTGGCCTCGAGAGCCTCTTCGGCTTCTAA

Upstream 100 bases:

>100_bases
GAGGGCATGCCCGTAGGCCTCGCAGGGGCTGAGCTAGCAGAACCTCTAGGAGTGATGCTCCGAAGAGGAGAGGAGAGAGC
ATAAAGATAAAGAAGCCCCT

Downstream 100 bases:

>100_bases
TAGGCTCGCTACAAGCCAGCCGGTACCCGAGGAGTGTTTTTACCCCCTCTCAGCTGCGGAGCCTCGCATTCCTCAGTACT
TCAAGCATTTTCCTCCTAAC

Product: 50S ribosomal protein L12P

Products: NA

Alternate protein names: Ribosomal protein 'A' [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSSQRPGREGRAEWRLAGMEYIYASLVLYAAGKEINEENLKKILEAAGIQVDEARVKAVVAALKNINIDEVIKSATAMPV
APAAAPAPAAPAAAEEKKEEEKEEEEKKKEEVSEEQLAAGLESLFGF

Sequences:

>Translated_127_residues
MSSQRPGREGRAEWRLAGMEYIYASLVLYAAGKEINEENLKKILEAAGIQVDEARVKAVVAALKNINIDEVIKSATAMPV
APAAAPAPAAPAAAEEKKEEEKEEEEKKKEEVSEEQLAAGLESLFGF
>Mature_126_residues
SSQRPGREGRAEWRLAGMEYIYASLVLYAAGKEINEENLKKILEAAGIQVDEARVKAVVAALKNINIDEVIKSATAMPVA
PAAAPAPAAPAAAEEKKEEEKEEEEKKKEEVSEEQLAAGLESLFGF

Specific function: Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation [H]

COG id: COG2058

COG function: function code J; Ribosomal protein L12E/L44/L45/RPP1/RPP2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L12P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001813
- InterPro:   IPR022295 [H]

Pfam domain/function: PF00428 Ribosomal_60s [H]

EC number: NA

Molecular weight: Translated: 13728; Mature: 13596

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQRPGREGRAEWRLAGMEYIYASLVLYAAGKEINEENLKKILEAAGIQVDEARVKAVV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AALKNINIDEVIKSATAMPVAPAAAPAPAAPAAAEEKKEEEKEEEEKKKEEVSEEQLAAG
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESLFGF
HHHHHCC
>Mature Secondary Structure 
SSQRPGREGRAEWRLAGMEYIYASLVLYAAGKEINEENLKKILEAAGIQVDEARVKAVV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AALKNINIDEVIKSATAMPVAPAAAPAPAAPAAAEEKKEEEKEEEEKKKEEVSEEQLAAG
HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESLFGF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7966335; 2497941 [H]