| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027290
Identifier: 124027290
GI number: 124027290
Start: 383942
End: 384664
Strand: Direct
Name: 124027290
Synonym: Hbut_0398
Alternate gene names: NA
Gene position: 383942-384664 (Clockwise)
Preceding gene: 124027288
Following gene: 124027291
Centisome position: 23.03
GC content: 52.01
Gene sequence:
>723_bases ATGGCTGGTATAAGGGTGCTGGGGATAAACGGCTCTGCTAGAAAGTACGGTAACAGCTTCAAGATGCTATGGATAGCACT TAAGGCTGCAGAGGACGAGGGCGCCGAGACCGAGATAATACACCTCTACGACTACAAGCTGATACTCTGCATGGCATGTT ACTCGGACAACCTCTACGAGTGCTACTACCCGAAGAGATGCCCCCTAGGACTGGAGGACCAGTACCACGAGATAGCCGAG AAGATATTGTCGAGCCATGCTGTGATATTCTCGACACCAGTATACTGGTTTATGGCCTCTGCAGCTGTTAAGACCCTTGT AGAACGTATGACCGGCATGGAGAACATGCTATACCATATCGGTAAGAGCCTCCTCGACGGCAAGGTTGCAGGTATAATAG CTGTCGGCGAGGAAACTGGAGCCACCATGGCCCTATCCTGGCTTATGCTAACACTTAACATGATGGGGTTCCATATACCA GCCTGGGCTACCGTGTACTACCACGGGAAGGGAGACGCCATGGATAATGAGCAAGCTGTACTAGACGCCTATAATCTCGG CCGCAACGTAGCTAGGCTAGCAAAGATCCTTGCCGGCAAGGTTGACGGAGAGCCATGGTATAGCCTAGACTACCGGAGTA GAGCACGCCAGCTTGCCGAAGAAGCCAAAAAGACCGCTATGAATAACCGCGAAGCTGCACGGAGGGATAGGCCGTGGCTA TAA
Upstream 100 bases:
>100_bases TATACCCTCGAACACAACATATACGGGCCTAGCCAATGTTCGTGCCCTCGGACGCCTAAGTGGGGCTATCCACGCCCTTC CAGCTGGGGGCTGGTGCTGT
Downstream 100 bases:
>100_bases CCGTCTATGGCCCTGTAAGGCTTGGCGACCCCGCCATTATAACTCATGGCGGTGCTGGTAGCTGGAAGGCCCTTGAAAGG ATAGACCCGGCAGTAGAGGC
Product: multimeric flavodoxin, WrbA
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MAGIRVLGINGSARKYGNSFKMLWIALKAAEDEGAETEIIHLYDYKLILCMACYSDNLYECYYPKRCPLGLEDQYHEIAE KILSSHAVIFSTPVYWFMASAAVKTLVERMTGMENMLYHIGKSLLDGKVAGIIAVGEETGATMALSWLMLTLNMMGFHIP AWATVYYHGKGDAMDNEQAVLDAYNLGRNVARLAKILAGKVDGEPWYSLDYRSRARQLAEEAKKTAMNNREAARRDRPWL
Sequences:
>Translated_240_residues MAGIRVLGINGSARKYGNSFKMLWIALKAAEDEGAETEIIHLYDYKLILCMACYSDNLYECYYPKRCPLGLEDQYHEIAE KILSSHAVIFSTPVYWFMASAAVKTLVERMTGMENMLYHIGKSLLDGKVAGIIAVGEETGATMALSWLMLTLNMMGFHIP AWATVYYHGKGDAMDNEQAVLDAYNLGRNVARLAKILAGKVDGEPWYSLDYRSRARQLAEEAKKTAMNNREAARRDRPWL >Mature_239_residues AGIRVLGINGSARKYGNSFKMLWIALKAAEDEGAETEIIHLYDYKLILCMACYSDNLYECYYPKRCPLGLEDQYHEIAEK ILSSHAVIFSTPVYWFMASAAVKTLVERMTGMENMLYHIGKSLLDGKVAGIIAVGEETGATMALSWLMLTLNMMGFHIPA WATVYYHGKGDAMDNEQAVLDAYNLGRNVARLAKILAGKVDGEPWYSLDYRSRARQLAEEAKKTAMNNREAARRDRPWL
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 27038; Mature: 26906
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIRVLGINGSARKYGNSFKMLWIALKAAEDEGAETEIIHLYDYKLILCMACYSDNLYE CCCEEEEECCCCHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEE CYYPKRCPLGLEDQYHEIAEKILSSHAVIFSTPVYWFMASAAVKTLVERMTGMENMLYHI EECCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKSLLDGKVAGIIAVGEETGATMALSWLMLTLNMMGFHIPAWATVYYHGKGDAMDNEQAV HHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH LDAYNLGRNVARLAKILAGKVDGEPWYSLDYRSRARQLAEEAKKTAMNNREAARRDRPWL HHHHHCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC >Mature Secondary Structure AGIRVLGINGSARKYGNSFKMLWIALKAAEDEGAETEIIHLYDYKLILCMACYSDNLYE CCEEEEECCCCHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEE CYYPKRCPLGLEDQYHEIAEKILSSHAVIFSTPVYWFMASAAVKTLVERMTGMENMLYHI EECCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKSLLDGKVAGIIAVGEETGATMALSWLMLTLNMMGFHIPAWATVYYHGKGDAMDNEQAV HHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHH LDAYNLGRNVARLAKILAGKVDGEPWYSLDYRSRARQLAEEAKKTAMNNREAARRDRPWL HHHHHCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]