| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027232
Identifier: 124027232
GI number: 124027232
Start: 325324
End: 326208
Strand: Reverse
Name: 124027232
Synonym: Hbut_0335
Alternate gene names: NA
Gene position: 326208-325324 (Counterclockwise)
Preceding gene: 124027233
Following gene: 124027231
Centisome position: 19.57
GC content: 54.01
Gene sequence:
>885_bases ATGGCTATTGTAGTGCTAGCAGTTGTCCTACTCGCATCAGCTATTGTGGCATACCAGCTCCTCCCGGGCAAGGATACGGG CAATGTGAGGGTTAGGGCGACAACAACCACGAGCCTCTATGCTACGGGGCTGCTGGAGTACCTGGAGCAGGAGTTCAGGA AGACGCATCCGAAGGTGGAAATAGACTTCATACCTGTCGGTAGTGGTGAAGCTCTAAGGAGAGCTGCGCAGGGCGACGCT TGTATAGTGTTTGTCCACGCGCCAAGCCTAGAAAAGGAGTACATAGAGAAGGGCGTTATAGAGGATGGGAGGATATTCGC CTACAACTACTTCATAATCGTGGGCCCAGCTGATGACCCTGCGGGTGTGAGGCGGGCAGTTAACGCTGTAGATGCATTCC GGAGAATATACGAGGCGGGAGAGGCAGGCAAGGCCAAGTTTGTGAGCCGAGGCGACAACTCGGGCACACACGTGAAGGAG CTGAGCATCTGGAGGATGGCTAGCCTAGACCCTCACGGGAAGAAATGGTACCTGGAGGTTGGCGCTGGTATGGCTGACAC GCTCGTGAGAGCTAACGAGCTGGGAGCCTACACGCTAAGCGATATAGGCACCTACCTCAAGCTCAAGAAGGATGGACGTA TACCAAACCTCGAAATACTCTACAGTAACAGCATGGAGCTCATAAACATCTACAGCGTATACCTGGTCAAGAGCTGCCAG GGCGGGGAGAGGAAAGCTGCTGAAGAATTTGCAGAGTTTCTAGTTACACACCAGGACCTCATAGCAAGCTATGGTGTCGA GAAGTACGGCCAGCCACTATTCTACCCAGCAGAGGGCCACGAGGACGAGCTAGCCAGGATATGGCAGCAGCTCGCAGAGA GCTAA
Upstream 100 bases:
>100_bases AATTATTATTAGCAAAGGTCGTTATCCGGTACTAGGTAACGGATAAATATTTGCAGGCTCTGCCCGCAGAAAATGGATGG TGGTAGTGCGCAGCCGCACG
Downstream 100 bases:
>100_bases GCCGGGGGGTTCCCCTGGGTTGGGGGAGCTCGGAGACATCGTTTTTAGAAGCATATACGTCTCTGGAACAGCGACGCTCC TAGCCTCGCTTTGGAGTATA
Product: ABC-type tungstate transport system, permease component, TupB
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Periplasmic Protein; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAIVVLAVVLLASAIVAYQLLPGKDTGNVRVRATTTTSLYATGLLEYLEQEFRKTHPKVEIDFIPVGSGEALRRAAQGDA CIVFVHAPSLEKEYIEKGVIEDGRIFAYNYFIIVGPADDPAGVRRAVNAVDAFRRIYEAGEAGKAKFVSRGDNSGTHVKE LSIWRMASLDPHGKKWYLEVGAGMADTLVRANELGAYTLSDIGTYLKLKKDGRIPNLEILYSNSMELINIYSVYLVKSCQ GGERKAAEEFAEFLVTHQDLIASYGVEKYGQPLFYPAEGHEDELARIWQQLAES
Sequences:
>Translated_294_residues MAIVVLAVVLLASAIVAYQLLPGKDTGNVRVRATTTTSLYATGLLEYLEQEFRKTHPKVEIDFIPVGSGEALRRAAQGDA CIVFVHAPSLEKEYIEKGVIEDGRIFAYNYFIIVGPADDPAGVRRAVNAVDAFRRIYEAGEAGKAKFVSRGDNSGTHVKE LSIWRMASLDPHGKKWYLEVGAGMADTLVRANELGAYTLSDIGTYLKLKKDGRIPNLEILYSNSMELINIYSVYLVKSCQ GGERKAAEEFAEFLVTHQDLIASYGVEKYGQPLFYPAEGHEDELARIWQQLAES >Mature_293_residues AIVVLAVVLLASAIVAYQLLPGKDTGNVRVRATTTTSLYATGLLEYLEQEFRKTHPKVEIDFIPVGSGEALRRAAQGDAC IVFVHAPSLEKEYIEKGVIEDGRIFAYNYFIIVGPADDPAGVRRAVNAVDAFRRIYEAGEAGKAKFVSRGDNSGTHVKEL SIWRMASLDPHGKKWYLEVGAGMADTLVRANELGAYTLSDIGTYLKLKKDGRIPNLEILYSNSMELINIYSVYLVKSCQG GERKAAEEFAEFLVTHQDLIASYGVEKYGQPLFYPAEGHEDELARIWQQLAES
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32500; Mature: 32369
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVVLAVVLLASAIVAYQLLPGKDTGNVRVRATTTTSLYATGLLEYLEQEFRKTHPKVE CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEE IDFIPVGSGEALRRAAQGDACIVFVHAPSLEKEYIEKGVIEDGRIFAYNYFIIVGPADDP EEEEECCCCHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCH AGVRRAVNAVDAFRRIYEAGEAGKAKFVSRGDNSGTHVKELSIWRMASLDPHGKKWYLEV HHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCEEEHHHEEEECCCCCCCCEEEEEE GAGMADTLVRANELGAYTLSDIGTYLKLKKDGRIPNLEILYSNSMELINIYSVYLVKSCQ CCCHHHHHHHHHHCCCEEHHHHCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCC GGERKAAEEFAEFLVTHQDLIASYGVEKYGQPLFYPAEGHEDELARIWQQLAES CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AIVVLAVVLLASAIVAYQLLPGKDTGNVRVRATTTTSLYATGLLEYLEQEFRKTHPKVE HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEE IDFIPVGSGEALRRAAQGDACIVFVHAPSLEKEYIEKGVIEDGRIFAYNYFIIVGPADDP EEEEECCCCHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEEEEECCCCH AGVRRAVNAVDAFRRIYEAGEAGKAKFVSRGDNSGTHVKELSIWRMASLDPHGKKWYLEV HHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCEEEHHHEEEECCCCCCCCEEEEEE GAGMADTLVRANELGAYTLSDIGTYLKLKKDGRIPNLEILYSNSMELINIYSVYLVKSCQ CCCHHHHHHHHHHCCCEEHHHHCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCC GGERKAAEEFAEFLVTHQDLIASYGVEKYGQPLFYPAEGHEDELARIWQQLAES CCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA