| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027219
Identifier: 124027219
GI number: 124027219
Start: 312009
End: 312779
Strand: Reverse
Name: 124027219
Synonym: Hbut_0322
Alternate gene names: NA
Gene position: 312779-312009 (Counterclockwise)
Preceding gene: 124027220
Following gene: 124027218
Centisome position: 18.76
GC content: 57.59
Gene sequence:
>771_bases ATGCCCCTACTGCTCGGGCATCGCGCCAATACACCGCGCTGGATCCGGTCATATCTTCGCTGCGCGGATGGCGTAGAGAT TGATGTTACGCTCCACAATGGAAGACTCGTAGCTAGCCACATACTACCAGATACTAGGCCCCGCCTTCTAAGGGAGAGGC TTGCAAGGCTCCTGGAAACAATCCATTTGAGCGGCCCCTATGGGCTAGAGGATCTCGTTTCTCTCGTGCCCCCTGAGTCG GCGATACTCTTCGACCTAAAGACAGCTAGGGCTGCACACCAGCTTGCAGGCTTCCTAGAAGGCCTTAGCCGTTCCAGCCT GGTCATGGTGGCCACGAGATGGCATAGTCTTGTTGGCTTATTGAAAACTGATGGGGTACGTGTGCTGCTAAGCCTCGATA GCAGGCCTGCTAGGCCTGTAGAACTCGTAGAAGCAGCTGGTGCTGACGGGGTTTCCGTGAGGGCGGAGTACATTGATGAG GAGTTTGTGGAGGAGCTACACTCGCACGGCTACCTAGTCACGGCCTGGACTGTAAACATGTCAGGGGAAGCTGCGAGGCT CCAAGCCTACGGGGTAGACGTGATTGTCACGGAGTACCCCTGCGAGCTACGAGCCCTTGCGGGAAGATGCAGGAAGAGAA TGGACTGGCCGTCCCGATGGGGTGCCAGAGTTCTCGTTCAGAGGCCAGCGATGGCTGAAGCGGTAATGCCTGCTAGTCAC CCACTTGGCCCCACCTATGGAGCACGTCAGGCAGCCCGAGGCGGTGCCTAA
Upstream 100 bases:
>100_bases GCAATGATAGGCCTAGGCATTAATCTTCAAAACTAGTTAGAGGTTACGCAGGGCCGGAACAGCCTCTGCCCGAGGAGGAG GCGCGGCAGGCTTGGCATGT
Downstream 100 bases:
>100_bases TTAGGGCTAGCCCCGTCACGGAGCGAGGCTCGGAGGGACGAGTTGCAGTGAGCGGCGAGGCGTACGAGTGCGAAAAGCCG CCATGTCTCCACGTTGTCGT
Product: glycerophosphoryl diester phosphodiesterase, UgpQ
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPLLLGHRANTPRWIRSYLRCADGVEIDVTLHNGRLVASHILPDTRPRLLRERLARLLETIHLSGPYGLEDLVSLVPPES AILFDLKTARAAHQLAGFLEGLSRSSLVMVATRWHSLVGLLKTDGVRVLLSLDSRPARPVELVEAAGADGVSVRAEYIDE EFVEELHSHGYLVTAWTVNMSGEAARLQAYGVDVIVTEYPCELRALAGRCRKRMDWPSRWGARVLVQRPAMAEAVMPASH PLGPTYGARQAARGGA
Sequences:
>Translated_256_residues MPLLLGHRANTPRWIRSYLRCADGVEIDVTLHNGRLVASHILPDTRPRLLRERLARLLETIHLSGPYGLEDLVSLVPPES AILFDLKTARAAHQLAGFLEGLSRSSLVMVATRWHSLVGLLKTDGVRVLLSLDSRPARPVELVEAAGADGVSVRAEYIDE EFVEELHSHGYLVTAWTVNMSGEAARLQAYGVDVIVTEYPCELRALAGRCRKRMDWPSRWGARVLVQRPAMAEAVMPASH PLGPTYGARQAARGGA >Mature_255_residues PLLLGHRANTPRWIRSYLRCADGVEIDVTLHNGRLVASHILPDTRPRLLRERLARLLETIHLSGPYGLEDLVSLVPPESA ILFDLKTARAAHQLAGFLEGLSRSSLVMVATRWHSLVGLLKTDGVRVLLSLDSRPARPVELVEAAGADGVSVRAEYIDEE FVEELHSHGYLVTAWTVNMSGEAARLQAYGVDVIVTEYPCELRALAGRCRKRMDWPSRWGARVLVQRPAMAEAVMPASHP LGPTYGARQAARGGA
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28163; Mature: 28032
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLLGHRANTPRWIRSYLRCADGVEIDVTLHNGRLVASHILPDTRPRLLRERLARLLET CCEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHH IHLSGPYGLEDLVSLVPPESAILFDLKTARAAHQLAGFLEGLSRSSLVMVATRWHSLVGL HHCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH LKTDGVRVLLSLDSRPARPVELVEAAGADGVSVRAEYIDEEFVEELHSHGYLVTAWTVNM HHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEC SGEAARLQAYGVDVIVTEYPCELRALAGRCRKRMDWPSRWGARVLVQRPAMAEAVMPASH CCCHHEEEEECEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCCCC PLGPTYGARQAARGGA CCCCCCCCHHHCCCCC >Mature Secondary Structure PLLLGHRANTPRWIRSYLRCADGVEIDVTLHNGRLVASHILPDTRPRLLRERLARLLET CEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHH IHLSGPYGLEDLVSLVPPESAILFDLKTARAAHQLAGFLEGLSRSSLVMVATRWHSLVGL HHCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH LKTDGVRVLLSLDSRPARPVELVEAAGADGVSVRAEYIDEEFVEELHSHGYLVTAWTVNM HHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEC SGEAARLQAYGVDVIVTEYPCELRALAGRCRKRMDWPSRWGARVLVQRPAMAEAVMPASH CCCHHEEEEECEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCCCC PLGPTYGARQAARGGA CCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA