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The map label for this gene is 124027213

Identifier: 124027213

GI number: 124027213

Start: 306354

End: 306773

Strand: Direct

Name: 124027213

Synonym: Hbut_0316

Alternate gene names: NA

Gene position: 306354-306773 (Clockwise)

Preceding gene: 124027212

Following gene: 124027214

Centisome position: 18.38

GC content: 58.81

Gene sequence:

>420_bases
TTGGTGGTCAAGACTGGTGTCTCGCTACCCGACGAACTCTACGAGAAGCTTGTCTCCCTAGCCCAGCGCGCGGGCTACCC
GAGTATCTCAAAAGCTATACGGGACGCCGTAGAGTTATTCATAGCCTTCAACACCTGGTGGAGCAGCCAGGGCCCCGTAA
CCGGTGTCCTGCACCTCCTAGCCGAGGCCAAGCATGGCAGCGAAATCCAGGAGGCCCTGCAGGACGCCGAGGAGGTTGTC
GAGGCTGTACTATATCGGAGGCTCGGAGCATCCTACATAGCCGTGATAGTGGTTGTTGAAGGGGAACCCGGCAGGATTAA
AGACCTCTACAAGAAGCTCACACGGCTCCGTGGAGTACTAGCTGTCCAGCCCGCCCTCCTCCCTGCCCCAGCAGCTGCTA
CACGTGGTGTGCAAGGTTGA

Upstream 100 bases:

>100_bases
GCTGTGGCAGCACCGATGTGGAGATAGTTGAGGGGAAGGGTGTAGTGCTGCACAGCGTAGTCATAGAGACAGACGAGGAA
AAGGGGTAGGGGAGAACTCC

Downstream 100 bases:

>100_bases
CCCGCATCGTGGTAGTAGGTTCAGGATTTGCGGGGGTAGAAGCTGTTGCCAGCCTTTCGAGCCTCTGCGACCGCTACGAG
TGCATCTGGGTTACTGCAAG

Product: putative nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLLAEAKHGSEIQEALQDAEEVV
EAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRGVLAVQPALLPAPAAATRGVQG

Sequences:

>Translated_139_residues
MVVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLLAEAKHGSEIQEALQDAEEVV
EAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRGVLAVQPALLPAPAAATRGVQG
>Mature_139_residues
MVVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLLAEAKHGSEIQEALQDAEEVV
EAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRGVLAVQPALLPAPAAATRGVQG

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 15007; Mature: 15007

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLL
CEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AEAKHGSEIQEALQDAEEVVEAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRGVL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
AVQPALLPAPAAATRGVQG
HHCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MVVKTGVSLPDELYEKLVSLAQRAGYPSISKAIRDAVELFIAFNTWWSSQGPVTGVLHLL
CEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AEAKHGSEIQEALQDAEEVVEAVLYRRLGASYIAVIVVVEGEPGRIKDLYKKLTRLRGVL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
AVQPALLPAPAAATRGVQG
HHCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA