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The map label for this gene is yurM [H]

Identifier: 124027206

GI number: 124027206

Start: 299853

End: 300674

Strand: Reverse

Name: yurM [H]

Synonym: Hbut_0309

Alternate gene names: 124027206

Gene position: 300674-299853 (Counterclockwise)

Preceding gene: 124027207

Following gene: 124027205

Centisome position: 18.04

GC content: 53.16

Gene sequence:

>822_bases
GTGGAGGAGGCTAGCCCAGTCCGCTATGCGCTTCACGGCATACTTGTGGCGGCAGCTGCAGCCCTCGCGGTTGCATGGGT
GCTAGTACCTATAGCTATCTCGGTGCTTTACGCGTTTAGTACACCCCAGGACTACTACGACCCTAACAAGGTTATACCAA
TCCGCTTCACATTAGAGCATGTCCGGGATCTATTAGCTCTCGGCGCTAGCAAGGCGGCATTTAACAGTGTAGTGGTAGCA
GTGCTAACTATTGTCCTCAGCTTCCTGCTGGGACTCCCTGCGGGCTATGCATTTGCACGCTTTGTATTCCCCGGCCGGGA
CGCGCTGAAACTGCTAATAGTCGGTATGAGGATGTTTCCGATAATAGTGATAGCTGTGCCGCTAGCAACCCTCTACATAA
GACTCGGCATATACGATACACCGCTAGGCGTAGCCCTAGCCCACACAGCCATGGCTCTACCATTCGTTGTGCTAGTGACA
TCAAGCATATTCGCTGGGGTGCCGCGAGAGCTTGAGGAGGCAGGGCTAGTCTTTGGGCTAAATAGGCTCGGCGTATTTCT
AAGGATAACATTACCGCTAGCCCTCCCAGGCCTAGCTGCGGCAGCGATATTCACCTTCATAATGTCCTGGAACGAGGTGT
TCATAGCCTCCATACTCACCACTCTGAACCGTACGCTGCCAGCATTCATCCTCGTATCAGCTATGGCAGCTCCTGATTTC
ATCAAGTTCGCTGCGGGCTTCCTCATAGTCCTCCCCGCAATGGTGTTTGTATTCATCGCGAGGAGGTACCTAATCGCAAT
GTGGGGTATAACGCTGAGGTGA

Upstream 100 bases:

>100_bases
CTCTATGCATTAATAATAGCGGCTATCTCCCTCAGCCTTGGCGCCCTCTACATCAGATTCTTCAAGGCAAGGTATCTTGA
GGCTGGGAGGTGACACCGGG

Downstream 100 bases:

>100_bases
AGTGTTGTGGTGGATGTACACCTAGTCAGTGTAACCAAGAGGTTCGGCAGGACGATAGCAGTGGATCACGTGGATCTCGA
CGTGGAAGACGGGGAGTTTA

Product: ABC-type sugar transport system, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MEEASPVRYALHGILVAAAAALAVAWVLVPIAISVLYAFSTPQDYYDPNKVIPIRFTLEHVRDLLALGASKAAFNSVVVA
VLTIVLSFLLGLPAGYAFARFVFPGRDALKLLIVGMRMFPIIVIAVPLATLYIRLGIYDTPLGVALAHTAMALPFVVLVT
SSIFAGVPRELEEAGLVFGLNRLGVFLRITLPLALPGLAAAAIFTFIMSWNEVFIASILTTLNRTLPAFILVSAMAAPDF
IKFAAGFLIVLPAMVFVFIARRYLIAMWGITLR

Sequences:

>Translated_273_residues
MEEASPVRYALHGILVAAAAALAVAWVLVPIAISVLYAFSTPQDYYDPNKVIPIRFTLEHVRDLLALGASKAAFNSVVVA
VLTIVLSFLLGLPAGYAFARFVFPGRDALKLLIVGMRMFPIIVIAVPLATLYIRLGIYDTPLGVALAHTAMALPFVVLVT
SSIFAGVPRELEEAGLVFGLNRLGVFLRITLPLALPGLAAAAIFTFIMSWNEVFIASILTTLNRTLPAFILVSAMAAPDF
IKFAAGFLIVLPAMVFVFIARRYLIAMWGITLR
>Mature_273_residues
MEEASPVRYALHGILVAAAAALAVAWVLVPIAISVLYAFSTPQDYYDPNKVIPIRFTLEHVRDLLALGASKAAFNSVVVA
VLTIVLSFLLGLPAGYAFARFVFPGRDALKLLIVGMRMFPIIVIAVPLATLYIRLGIYDTPLGVALAHTAMALPFVVLVT
SSIFAGVPRELEEAGLVFGLNRLGVFLRITLPLALPGLAAAAIFTFIMSWNEVFIASILTTLNRTLPAFILVSAMAAPDF
IKFAAGFLIVLPAMVFVFIARRYLIAMWGITLR

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=222, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787368, Length=150, Percent_Identity=30, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790464, Length=257, Percent_Identity=27.6264591439689, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29492; Mature: 29492

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]