| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027145
Identifier: 124027145
GI number: 124027145
Start: 235778
End: 236569
Strand: Reverse
Name: 124027145
Synonym: Hbut_0248
Alternate gene names: NA
Gene position: 236569-235778 (Counterclockwise)
Preceding gene: 124027146
Following gene: 124027144
Centisome position: 14.19
GC content: 53.79
Gene sequence:
>792_bases GTGGCTATTCCAAGCACTATGCTGAGGGTGCTTAAGCGGAGGCCGCTAAGCTACACAGTGCTGGTTATATTCATGCTGGA TCGCTCCCTTAGCATGAGCGAGCTAAAAACCTATGATCATAGGAGCAAGTGGGAGCACCTCGTAGAGCTTGTGGAAAGGC TCTTAGCGAGGCTTGCCCGTAGCAATATGGCGCCAGCGTTCCGCGTAGGCTTCGTATGGTTTAGCGATGACGTGAAAGTC GTAGAGAGAGGTGGCGCCGTATACTTCCCGGTAACTGAGCACAATCCAGCACTCCGTGTATTCCAGGAGAGCACGGAGGA GAACCGCCCTTACGGCATGACCGCTATGGCCGACGCCCTTGAACACGCTGCAATGATTATCGAGAGGTACATCGAAGACA CTAGTATACCCTCAGAGAAGTATGTAACGGTGTTCATGTTTACCGACGGCAAGGAGACTAAGAGGACTCCGGAGGACGTT GTAGAGGTTGCAGACCGGATTACGGGGGAGCTGCAGGAGAAGCTTAGGGCTCTAAACCAGAGGAACCGCATAGGCCTCGC AACGATAGCGCTAGGCCTTGATGCTGACCGCGAGACGCTACGCACTATTGCGAGCTTCCTAAGGGAGGCTCAGAGAAGGG TGCTGGAAGAGCGCGGCCTCATAGACCTAGTTGATCCGCCATACCACGAGAAGATGTTCATTGACGCGCCAAGGAACGAT AAGATCACCAGGGAGTGGGAAGAGGCTGTGAGAAGGTTCGTTGAGAGGCTAAGCGAGACAGCGATTTTTTAG
Upstream 100 bases:
>100_bases GGTAACAATCCTGCAGAAGGCAGGGAAGGCCGAGACGGGGGAGGGAGGGTAAATCCAGGGCCCAATGGGATAGTAGCTGG GTAGGGGAAGGTGGGAGGCT
Downstream 100 bases:
>100_bases ACTCCATACAGCTCCACAACCTAGTGGGGGTGCTGGCAACGGGATGACCTTTATCCCGCTGGTTTTTCACGACGGCAGTG TCGTGGAGACAAGTACTGAT
Product: von Willebrand factor type A protein (vWA)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAIPSTMLRVLKRRPLSYTVLVIFMLDRSLSMSELKTYDHRSKWEHLVELVERLLARLARSNMAPAFRVGFVWFSDDVKV VERGGAVYFPVTEHNPALRVFQESTEENRPYGMTAMADALEHAAMIIERYIEDTSIPSEKYVTVFMFTDGKETKRTPEDV VEVADRITGELQEKLRALNQRNRIGLATIALGLDADRETLRTIASFLREAQRRVLEERGLIDLVDPPYHEKMFIDAPRND KITREWEEAVRRFVERLSETAIF
Sequences:
>Translated_263_residues MAIPSTMLRVLKRRPLSYTVLVIFMLDRSLSMSELKTYDHRSKWEHLVELVERLLARLARSNMAPAFRVGFVWFSDDVKV VERGGAVYFPVTEHNPALRVFQESTEENRPYGMTAMADALEHAAMIIERYIEDTSIPSEKYVTVFMFTDGKETKRTPEDV VEVADRITGELQEKLRALNQRNRIGLATIALGLDADRETLRTIASFLREAQRRVLEERGLIDLVDPPYHEKMFIDAPRND KITREWEEAVRRFVERLSETAIF >Mature_262_residues AIPSTMLRVLKRRPLSYTVLVIFMLDRSLSMSELKTYDHRSKWEHLVELVERLLARLARSNMAPAFRVGFVWFSDDVKVV ERGGAVYFPVTEHNPALRVFQESTEENRPYGMTAMADALEHAAMIIERYIEDTSIPSEKYVTVFMFTDGKETKRTPEDVV EVADRITGELQEKLRALNQRNRIGLATIALGLDADRETLRTIASFLREAQRRVLEERGLIDLVDPPYHEKMFIDAPRNDK ITREWEEAVRRFVERLSETAIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30537; Mature: 30405
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPSTMLRVLKRRPLSYTVLVIFMLDRSLSMSELKTYDHRSKWEHLVELVERLLARLAR CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMAPAFRVGFVWFSDDVKVVERGGAVYFPVTEHNPALRVFQESTEENRPYGMTAMADAL CCCCCEEEEEEEEECCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHH EHAAMIIERYIEDTSIPSEKYVTVFMFTDGKETKRTPEDVVEVADRITGELQEKLRALNQ HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNRIGLATIALGLDADRETLRTIASFLREAQRRVLEERGLIDLVDPPYHEKMFIDAPRND CCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCC KITREWEEAVRRFVERLSETAIF CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIPSTMLRVLKRRPLSYTVLVIFMLDRSLSMSELKTYDHRSKWEHLVELVERLLARLAR CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMAPAFRVGFVWFSDDVKVVERGGAVYFPVTEHNPALRVFQESTEENRPYGMTAMADAL CCCCCEEEEEEEEECCCHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHH EHAAMIIERYIEDTSIPSEKYVTVFMFTDGKETKRTPEDVVEVADRITGELQEKLRALNQ HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNRIGLATIALGLDADRETLRTIASFLREAQRRVLEERGLIDLVDPPYHEKMFIDAPRND CCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCC KITREWEEAVRRFVERLSETAIF CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA