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The map label for this gene is ydaO [C]

Identifier: 124026994

GI number: 124026994

Start: 83933

End: 84958

Strand: Direct

Name: ydaO [C]

Synonym: Hbut_0094

Alternate gene names: 124026994

Gene position: 83933-84958 (Clockwise)

Preceding gene: 124026993

Following gene: 124026995

Centisome position: 5.03

GC content: 52.53

Gene sequence:

>1026_bases
ATGTCACAGTCTATGTTGCAGCAAGTACGGGGTAACGAAGCTAGGCTATACCGCTGCAGCCTCTGCGGAGAGCCTGCTGC
CGCTGAGCTGAGATATGCTAGGCTGAGGCTCTGCAAGAAACACTTCATCGAGTTTATAAATAGGAAGGTTGAGCGCACCC
TACGCCGTGTCGGCGCGCTACGCAAGGGTGTAAAGATACTTGTAGCGATTTCGGGTGGCAAGGATAGTGCTGTAACGCTT
GCAGCACTTTCCGACCTGGCAAAGAAGTATGGCATCGAGGTCTACGCTATACACCTACGCCTAGGCTTCGGCGAGTTCTC
AGCCAAGGTTGAGGAGAGAGTTAGGAGTCTATGCAACATGCTCGGTATACCCTGCATAGTGGTTGATGTTGCCGAAGCAG
TGGGCGATCCGGTACACATACTTGCACGCAAGGCGAGGAGGCCAGCATGCAGCGTCTGTGGCCTCGTGAAGAGGTATTTC
CTAAATGCGTCTGCAATAGAGCTAGGCGCCGACTATGTAGCGCTTGGCCACAATGCAGACGACATAATAGCCTATAGCAT
CAAGGCCTTTCTAAACCAGGATCTGGAGGCACTAGCAAAGTTTGGCCCTGTAACAACAAGCATTGACGACCTAGCTGTTG
CTAGGCTTAGGCCACTCTACGAGGTCTACGAGAAGGAGGATGTACTCTATGCTATTCTCCGAGGCCTACCTGTAGTCTTT
GATAAGTGTCCGTTCAGACCAGAGGCCCCCATGGAGGATACGATAAAGGAGATGATCAACAAACTGGAGGACAAACATCC
CGGTATAAAGATCTCCTTCCTAAGGAGGCTCGAGAAGAGGATAAAGCTCTACGGAGAGTTGGCAGGCAGCGCAAAGCCTG
GACGCTGCAAGTACTGTGGCCTCATAAGCCAGGGCGATGAGTGTAGCTTCTGTAGACTCACACGCCGCATCTACGGCGAG
CCCAGGGGACCGAAGGTCAGGGAATACTTGAAGCAGGTTATCCAGAGGAGCTTTGCAACCAGGTAG

Upstream 100 bases:

>100_bases
ATACTGGAGAAGCTCGGCATACCGCTAGAAGCGGCTGTAGTTGTGAGGACGCGTGACGTGAAGCCGCTCCTCCCTGACGA
GCATGTGGGTGATGGCGAAG

Downstream 100 bases:

>100_bases
AGCGGATATGTGGGGGATAGGGTGGAGCAGAAAGAACCCCGAAGGATAGCCTCAACGTCGCCGGAGCCAGCAAATAAACC
GAAGATAGCGCTTAGAGAGG

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSQSMLQQVRGNEARLYRCSLCGEPAAAELRYARLRLCKKHFIEFINRKVERTLRRVGALRKGVKILVAISGGKDSAVTL
AALSDLAKKYGIEVYAIHLRLGFGEFSAKVEERVRSLCNMLGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRYF
LNASAIELGADYVALGHNADDIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVLYAILRGLPVVF
DKCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKRIKLYGELAGSAKPGRCKYCGLISQGDECSFCRLTRRIYGE
PRGPKVREYLKQVIQRSFATR

Sequences:

>Translated_341_residues
MSQSMLQQVRGNEARLYRCSLCGEPAAAELRYARLRLCKKHFIEFINRKVERTLRRVGALRKGVKILVAISGGKDSAVTL
AALSDLAKKYGIEVYAIHLRLGFGEFSAKVEERVRSLCNMLGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRYF
LNASAIELGADYVALGHNADDIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVLYAILRGLPVVF
DKCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKRIKLYGELAGSAKPGRCKYCGLISQGDECSFCRLTRRIYGE
PRGPKVREYLKQVIQRSFATR
>Mature_340_residues
SQSMLQQVRGNEARLYRCSLCGEPAAAELRYARLRLCKKHFIEFINRKVERTLRRVGALRKGVKILVAISGGKDSAVTLA
ALSDLAKKYGIEVYAIHLRLGFGEFSAKVEERVRSLCNMLGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRYFL
NASAIELGADYVALGHNADDIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVLYAILRGLPVVFD
KCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKRIKLYGELAGSAKPGRCKYCGLISQGDECSFCRLTRRIYGEP
RGPKVREYLKQVIQRSFATR

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=293, Percent_Identity=29.3515358361775, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI1787606, Length=226, Percent_Identity=26.1061946902655, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17540090, Length=298, Percent_Identity=23.489932885906, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24651972, Length=298, Percent_Identity=28.8590604026846, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 38242; Mature: 38111

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSMLQQVRGNEARLYRCSLCGEPAAAELRYARLRLCKKHFIEFINRKVERTLRRVGAL
CCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGVKILVAISGGKDSAVTLAALSDLAKKYGIEVYAIHLRLGFGEFSAKVEERVRSLCNM
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
LGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRYFLNASAIELGADYVALGHNAD
HCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCC
DIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVLYAILRGLPVVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DKCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKRIKLYGELAGSAKPGRCKYCG
HCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
LISQGDECSFCRLTRRIYGEPRGPKVREYLKQVIQRSFATR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQSMLQQVRGNEARLYRCSLCGEPAAAELRYARLRLCKKHFIEFINRKVERTLRRVGAL
CHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGVKILVAISGGKDSAVTLAALSDLAKKYGIEVYAIHLRLGFGEFSAKVEERVRSLCNM
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
LGIPCIVVDVAEAVGDPVHILARKARRPACSVCGLVKRYFLNASAIELGADYVALGHNAD
HCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCC
DIIAYSIKAFLNQDLEALAKFGPVTTSIDDLAVARLRPLYEVYEKEDVLYAILRGLPVVF
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DKCPFRPEAPMEDTIKEMINKLEDKHPGIKISFLRRLEKRIKLYGELAGSAKPGRCKYCG
HCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
LISQGDECSFCRLTRRIYGEPRGPKVREYLKQVIQRSFATR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]