| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124026969
Identifier: 124026969
GI number: 124026969
Start: 56959
End: 58512
Strand: Reverse
Name: 124026969
Synonym: Hbut_0067
Alternate gene names: NA
Gene position: 58512-56959 (Counterclockwise)
Preceding gene: 124026972
Following gene: 124026968
Centisome position: 3.51
GC content: 51.22
Gene sequence:
>1554_bases ATGGCGTCCCGAAACATAGTACTTGCTATAGGTATTATAGTTGCAATAGCTGTAATAGCTGGGGTAGTCTTGCTCACCGG AGGCAAGGAGAAACCTGCAGCTCCCGAGCAGCCAACAACACCCACCACACCTAGCACTGAGCAGCCCCAGCAGCCAGCAG AGCAGCCTGAAACACAGCCATCAGAGGAGCAGCCGCAAGAGCAACCACCGGAGACGCCAACACAACCAACTACTGAGTGT AAGGAGTGGATTGAGCTAACAGTGCTTACAAGGCATCCTGCCGATATCCAGGAGCAGGCTAGGGATCTATTCCTAGAGTC GGACCTCGCAAAGAGGTATTGCGTCAAGGATATAACGTTCATAGCTGTACCACCTGGCCTCTGGCAAACCTTCATCGAGA AGCAGAACATAGACGTAGCCTGGGGCGGCGGCCCAACGCTCTTCGATCTCCTATTCAAGAAAGGGCTGCTGAAGCCCCTC GAGACACAGATAGCGCTTGAGGCCGCGAGTCAAGTACCTGACACCTTTGCTGGCCAGCCGCTCAAGAGGGTGAAGGATGG CAAGGTGTATTGGGTTGCAGCAGCAATAGCTAGCTTCGGCTTCACCATTAACACAGAGGTAGCCCAGCAGCTCGACTATG ATGTATCAAAGCTCAAGTCCTGGCGCGACCTCGCAAGCGATGATCTCGGCCTCATACTTGTACAGTACAATACTCCGGCA CTAGCAATAGCCGATCCAACGCAGAGTACCAGTAATACAAGGATCTATGAAATCATTCTTCAGACGTACGGCTGGGATGA GGGCTGGCGCATACTAACCCTCATGGCTGCAAATGCACGCATAGAGCAGAGTAGCGGCCTTGTGCGCGACGACGTTATAG CGGGCATAGTAATGGTAGGCATCACTATAGACTTCTACGGTTACACAGCCGAGAGAATAAATCCAGCTTGTAAGTACATA CTGCCCGAAGGTGAGACGATAGTTAACGGCGACCCAATAGCCGTGACGATATCCACGAAGCATCCAGAAGCTGCAGAGGC TTTCATAGCGTGGGTACTAACGGAGGGTCAGAAGATTTGGCTAAGCCCCGAGATTAACCGGCTACCAGCAAACCCCAAGG TCTTTGAGACCCCGGAGGGCCAACAGAGGCCTGATCTACGTGATGCATACTATCGCGCAATGCAAGTTAAAGTGATACAA TTCAACGATACGCTAGCATTGGAGATAGAGACTGCTATGAGACAGTATTTCAAGGCAACGCTAGTAGACGAACACCAAAC ATTACAGCAAGCATGGAAGAGGCTCCTAGAGGCATACTATGTCGAGAAGAAGATAGACAAGGCTACATTCGAAGCGCTTA AGCAGAAGCTAACTGATACAGTTGAATACAAGGACCCGCTCACCGGCGAGATTGTAAAGTTTACGTTGGAGGATGCCAGG AGAGTAAATAAAATATTGGAGCAAAACCCAGCAGTAACCGAGAAGTACATGAGCGCTTGGCGTGAAGCTGCTAGGCAGAA ATACGAGGAGGTCCTAGACGCCCTTGGCGGCTAG
Upstream 100 bases:
>100_bases CACAACGCTATTAATAATTTTCAATCACTCGCGATAGGCCCAGGATTGCAAACTTTATTACACAATGCAGTACAATTCGG CTCTACGCGGGTAAGAGGGT
Downstream 100 bases:
>100_bases GCAGAAGCTCATAGATATCGGGAGGAATGCGTTATTAGCCGCCAAGAGGGCTATACCCAGGGCCAAAACCGATATCGAAA TAATACTTTTACTCTACATA
Product: ABC-type Fe3+ transport system, periplasmic component
Products: NA
Alternate protein names: ABC-Type Iron(III) Transport System Periplasmic Component; ABC-Type Fe3+ Transport System Periplasmic Component; Phosphoglycerate Transport Regulatory Protein; ABC-Type Fe3+ Transport System Periplasmic Component AfuA; ABC-Type Transport System Periplasmic Component; Phosphoglycerate Transport Regulatory Protein PgtC; Phosphoglycerate Transport Regulatory PgtC-Like Protein
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MASRNIVLAIGIIVAIAVIAGVVLLTGGKEKPAAPEQPTTPTTPSTEQPQQPAEQPETQPSEEQPQEQPPETPTQPTTEC KEWIELTVLTRHPADIQEQARDLFLESDLAKRYCVKDITFIAVPPGLWQTFIEKQNIDVAWGGGPTLFDLLFKKGLLKPL ETQIALEAASQVPDTFAGQPLKRVKDGKVYWVAAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDLGLILVQYNTPA LAIADPTQSTSNTRIYEIILQTYGWDEGWRILTLMAANARIEQSSGLVRDDVIAGIVMVGITIDFYGYTAERINPACKYI LPEGETIVNGDPIAVTISTKHPEAAEAFIAWVLTEGQKIWLSPEINRLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQ FNDTLALEIETAMRQYFKATLVDEHQTLQQAWKRLLEAYYVEKKIDKATFEALKQKLTDTVEYKDPLTGEIVKFTLEDAR RVNKILEQNPAVTEKYMSAWREAARQKYEEVLDALGG
Sequences:
>Translated_517_residues MASRNIVLAIGIIVAIAVIAGVVLLTGGKEKPAAPEQPTTPTTPSTEQPQQPAEQPETQPSEEQPQEQPPETPTQPTTEC KEWIELTVLTRHPADIQEQARDLFLESDLAKRYCVKDITFIAVPPGLWQTFIEKQNIDVAWGGGPTLFDLLFKKGLLKPL ETQIALEAASQVPDTFAGQPLKRVKDGKVYWVAAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDLGLILVQYNTPA LAIADPTQSTSNTRIYEIILQTYGWDEGWRILTLMAANARIEQSSGLVRDDVIAGIVMVGITIDFYGYTAERINPACKYI LPEGETIVNGDPIAVTISTKHPEAAEAFIAWVLTEGQKIWLSPEINRLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQ FNDTLALEIETAMRQYFKATLVDEHQTLQQAWKRLLEAYYVEKKIDKATFEALKQKLTDTVEYKDPLTGEIVKFTLEDAR RVNKILEQNPAVTEKYMSAWREAARQKYEEVLDALGG >Mature_516_residues ASRNIVLAIGIIVAIAVIAGVVLLTGGKEKPAAPEQPTTPTTPSTEQPQQPAEQPETQPSEEQPQEQPPETPTQPTTECK EWIELTVLTRHPADIQEQARDLFLESDLAKRYCVKDITFIAVPPGLWQTFIEKQNIDVAWGGGPTLFDLLFKKGLLKPLE TQIALEAASQVPDTFAGQPLKRVKDGKVYWVAAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDLGLILVQYNTPAL AIADPTQSTSNTRIYEIILQTYGWDEGWRILTLMAANARIEQSSGLVRDDVIAGIVMVGITIDFYGYTAERINPACKYIL PEGETIVNGDPIAVTISTKHPEAAEAFIAWVLTEGQKIWLSPEINRLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQF NDTLALEIETAMRQYFKATLVDEHQTLQQAWKRLLEAYYVEKKIDKATFEALKQKLTDTVEYKDPLTGEIVKFTLEDARR VNKILEQNPAVTEKYMSAWREAARQKYEEVLDALGG
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57864; Mature: 57733
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRNIVLAIGIIVAIAVIAGVVLLTGGKEKPAAPEQPTTPTTPSTEQPQQPAEQPETQP CCCCCEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEEQPQEQPPETPTQPTTECKEWIELTVLTRHPADIQEQARDLFLESDLAKRYCVKDITF CCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEE IAVPPGLWQTFIEKQNIDVAWGGGPTLFDLLFKKGLLKPLETQIALEAASQVPDTFAGQP EEECCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC LKRVKDGKVYWVAAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDLGLILVQYNTPA HHHCCCCCEEEHHHHHHHHCCEEEHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCE LAIADPTQSTSNTRIYEIILQTYGWDEGWRILTLMAANARIEQSSGLVRDDVIAGIVMVG EEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEHHCCCCHHHHHHHHHHHHH ITIDFYGYTAERINPACKYILPEGETIVNGDPIAVTISTKHPEAAEAFIAWVLTEGQKIW EEEEEECCCHHHCCCHHEEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHEEECCCEEE LSPEINRLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQFNDTLALEIETAMRQYFKAT ECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHEEEEEEECCEEEEEHHHHHHHHHHHH LVDEHQTLQQAWKRLLEAYYVEKKIDKATFEALKQKLTDTVEYKDPLTGEIVKFTLEDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RVNKILEQNPAVTEKYMSAWREAARQKYEEVLDALGG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASRNIVLAIGIIVAIAVIAGVVLLTGGKEKPAAPEQPTTPTTPSTEQPQQPAEQPETQP CCCCEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SEEQPQEQPPETPTQPTTECKEWIELTVLTRHPADIQEQARDLFLESDLAKRYCVKDITF CCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEE IAVPPGLWQTFIEKQNIDVAWGGGPTLFDLLFKKGLLKPLETQIALEAASQVPDTFAGQP EEECCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC LKRVKDGKVYWVAAAIASFGFTINTEVAQQLDYDVSKLKSWRDLASDDLGLILVQYNTPA HHHCCCCCEEEHHHHHHHHCCEEEHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCE LAIADPTQSTSNTRIYEIILQTYGWDEGWRILTLMAANARIEQSSGLVRDDVIAGIVMVG EEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCEEHHCCCCHHHHHHHHHHHHH ITIDFYGYTAERINPACKYILPEGETIVNGDPIAVTISTKHPEAAEAFIAWVLTEGQKIW EEEEEECCCHHHCCCHHEEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHEEECCCEEE LSPEINRLPANPKVFETPEGQQRPDLRDAYYRAMQVKVIQFNDTLALEIETAMRQYFKAT ECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHEEEEEEECCEEEEEHHHHHHHHHHHH LVDEHQTLQQAWKRLLEAYYVEKKIDKATFEALKQKLTDTVEYKDPLTGEIVKFTLEDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH RVNKILEQNPAVTEKYMSAWREAARQKYEEVLDALGG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA