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The map label for this gene is 124026912

Identifier: 124026912

GI number: 124026912

Start: 5540

End: 6829

Strand: Reverse

Name: 124026912

Synonym: Hbut_0008

Alternate gene names: NA

Gene position: 6829-5540 (Counterclockwise)

Preceding gene: 124026913

Following gene: 124026911

Centisome position: 0.41

GC content: 51.24

Gene sequence:

>1290_bases
TTGAGCATTCAGGAGGATGGGCTAGAGCCGATGCTCCTCGCAATAGGTATTGATAGCTTTGATACCCCCCTAGCTGGTTG
TACAACCCATTTCACCTCAATACTTGCATACACCCTGTCGATTCATGGCTATAGACTCGCTGACTACCCATGGCTTGTCC
GCTTAAACCCGGCTGTACCATGGAAGACCAGGGGCAATGGTGCCACCGCACTCCTAGTATCTGTTGACCGTGAGGACGAG
GCTCGCAGAGTAGCTGAAGAAGTAACTTCAAGGCTCGCCAAGGCCTATGGGTCTACAGGTAAGGAGAGCTTTGTCGCGAT
ACTACTTTACCATGCCGATAACCTCCAAGACTACATTACTGCTAGGCCACACTGCCTCGTGGAACTATACCGCAGGGCCG
TACACGAACTCGTACCTCTGAAGACCGCTATGAACTGCTTGGAGAGTATTAGGGAAGATGGAAAGACCAAGCTCATAGCC
CTACACGGCTCTACACATCGGGGCCTAGTAGGGGCACTAGCCGCCCTTGGAGCCGATCTAATAACTGACCACACATTCGA
ACTCATAGTCTACAGAAAGCCCAGAATGTGGTCCGAACCTCGCAGAATAGACGAGGACAGCATTATAGAGTTCGACTTGA
AAACTCGGCCCCTAACATTCCTAAACTACGACTATGAACAGTCCAAACCGCTAATAGCGCCACACGGCTTCGACCCTGTT
CTCTATGGCGTGCGGGGTGAGGAGCCACACATATTGTTAAAAGCACTGAAGATCATCGATGTGGAGGAGGAACCTAGCCA
TTGGACAATATTCAGGACTAATCAAGCTACCAATGCACACCTCCAGAGAAAGGAGATAGAACGTGTAAGACCCTACGACA
ACGCCATAGTCTGTGGCGTGATAGAGGACACAAAGCCTATACCTGGAGGCCACGTGATAGTCCGGCTATGCAACAACACA
TGCATAGATACTGCATTCTACAGGGAAACGGGGAGGCTGCGAAACCATGTCCTCAAACTGCCCCGCGGCACACTAGTCGA
GGTTGGGGGTCAGGTTAAGCCACACACTGACAAACTAACCCTCAACGCTGAGTATCTACGAATACTCGAGCCAGCATCGC
TACGTGCTGGAGGCTGCACAGCAACAATACCATCGGGACGTAACGTCATACTCTATCCTCCACGTGCAGCATTCCACCAC
CTTATGAAGCCGCCAGAGAGACCTCTACACCCATCAAAGAGCCTAGAGCCACCCTCAACCCCCATCCATTCCGACACCAT
TAGTTTATAA

Upstream 100 bases:

>100_bases
GATAGTTGTAAACGAGAGCGAAAAGAAATAGCCACTATGCAGCAAGGAGATTCGCCCAAAGCCTCACCCCCTTTTATCCA
GGCCCTCCGCAGTACACAGA

Downstream 100 bases:

>100_bases
TAGGGTAAACAACCCCTCAGCTTCCACTCCAGCCCACCATAGGGCCACAAGACACTGAAACCCATCACGGCAGCAATGAC
TCTAAGATCACTGCCAGCTG

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSIQEDGLEPMLLAIGIDSFDTPLAGCTTHFTSILAYTLSIHGYRLADYPWLVRLNPAVPWKTRGNGATALLVSVDREDE
ARRVAEEVTSRLAKAYGSTGKESFVAILLYHADNLQDYITARPHCLVELYRRAVHELVPLKTAMNCLESIREDGKTKLIA
LHGSTHRGLVGALAALGADLITDHTFELIVYRKPRMWSEPRRIDEDSIIEFDLKTRPLTFLNYDYEQSKPLIAPHGFDPV
LYGVRGEEPHILLKALKIIDVEEEPSHWTIFRTNQATNAHLQRKEIERVRPYDNAIVCGVIEDTKPIPGGHVIVRLCNNT
CIDTAFYRETGRLRNHVLKLPRGTLVEVGGQVKPHTDKLTLNAEYLRILEPASLRAGGCTATIPSGRNVILYPPRAAFHH
LMKPPERPLHPSKSLEPPSTPIHSDTISL

Sequences:

>Translated_429_residues
MSIQEDGLEPMLLAIGIDSFDTPLAGCTTHFTSILAYTLSIHGYRLADYPWLVRLNPAVPWKTRGNGATALLVSVDREDE
ARRVAEEVTSRLAKAYGSTGKESFVAILLYHADNLQDYITARPHCLVELYRRAVHELVPLKTAMNCLESIREDGKTKLIA
LHGSTHRGLVGALAALGADLITDHTFELIVYRKPRMWSEPRRIDEDSIIEFDLKTRPLTFLNYDYEQSKPLIAPHGFDPV
LYGVRGEEPHILLKALKIIDVEEEPSHWTIFRTNQATNAHLQRKEIERVRPYDNAIVCGVIEDTKPIPGGHVIVRLCNNT
CIDTAFYRETGRLRNHVLKLPRGTLVEVGGQVKPHTDKLTLNAEYLRILEPASLRAGGCTATIPSGRNVILYPPRAAFHH
LMKPPERPLHPSKSLEPPSTPIHSDTISL
>Mature_428_residues
SIQEDGLEPMLLAIGIDSFDTPLAGCTTHFTSILAYTLSIHGYRLADYPWLVRLNPAVPWKTRGNGATALLVSVDREDEA
RRVAEEVTSRLAKAYGSTGKESFVAILLYHADNLQDYITARPHCLVELYRRAVHELVPLKTAMNCLESIREDGKTKLIAL
HGSTHRGLVGALAALGADLITDHTFELIVYRKPRMWSEPRRIDEDSIIEFDLKTRPLTFLNYDYEQSKPLIAPHGFDPVL
YGVRGEEPHILLKALKIIDVEEEPSHWTIFRTNQATNAHLQRKEIERVRPYDNAIVCGVIEDTKPIPGGHVIVRLCNNTC
IDTAFYRETGRLRNHVLKLPRGTLVEVGGQVKPHTDKLTLNAEYLRILEPASLRAGGCTATIPSGRNVILYPPRAAFHHL
MKPPERPLHPSKSLEPPSTPIHSDTISL

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF08489 DUF1743; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 48076; Mature: 47945

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQEDGLEPMLLAIGIDSFDTPLAGCTTHFTSILAYTLSIHGYRLADYPWLVRLNPAVP
CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCC
WKTRGNGATALLVSVDREDEARRVAEEVTSRLAKAYGSTGKESFVAILLYHADNLQDYIT
CEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH
ARPHCLVELYRRAVHELVPLKTAMNCLESIREDGKTKLIALHGSTHRGLVGALAALGADL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHH
ITDHTFELIVYRKPRMWSEPRRIDEDSIIEFDLKTRPLTFLNYDYEQSKPLIAPHGFDPV
HCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHCCCCEECCCCCCCE
LYGVRGEEPHILLKALKIIDVEEEPSHWTIFRTNQATNAHLQRKEIERVRPYDNAIVCGV
EECCCCCCCHHHEEHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEE
IEDTKPIPGGHVIVRLCNNTCIDTAFYRETGRLRNHVLKLPRGTLVEVGGQVKPHTDKLT
ECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
LNAEYLRILEPASLRAGGCTATIPSGRNVILYPPRAAFHHLMKPPERPLHPSKSLEPPST
ECHHHHEEECCCCCCCCCEEEECCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCC
PIHSDTISL
CCCCCCCCC
>Mature Secondary Structure 
SIQEDGLEPMLLAIGIDSFDTPLAGCTTHFTSILAYTLSIHGYRLADYPWLVRLNPAVP
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCC
WKTRGNGATALLVSVDREDEARRVAEEVTSRLAKAYGSTGKESFVAILLYHADNLQDYIT
CEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH
ARPHCLVELYRRAVHELVPLKTAMNCLESIREDGKTKLIALHGSTHRGLVGALAALGADL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHH
ITDHTFELIVYRKPRMWSEPRRIDEDSIIEFDLKTRPLTFLNYDYEQSKPLIAPHGFDPV
HCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHCCCCEECCCCCCCE
LYGVRGEEPHILLKALKIIDVEEEPSHWTIFRTNQATNAHLQRKEIERVRPYDNAIVCGV
EECCCCCCCHHHEEHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEE
IEDTKPIPGGHVIVRLCNNTCIDTAFYRETGRLRNHVLKLPRGTLVEVGGQVKPHTDKLT
ECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEE
LNAEYLRILEPASLRAGGCTATIPSGRNVILYPPRAAFHHLMKPPERPLHPSKSLEPPST
ECHHHHEEECCCCCCCCCEEEECCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCC
PIHSDTISL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]