| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is thrC [H]
Identifier: 124026905
GI number: 124026905
Start: 1863437
End: 1864543
Strand: Direct
Name: thrC [H]
Synonym: NATL1_22001
Alternate gene names: 124026905
Gene position: 1863437-1864543 (Clockwise)
Preceding gene: 124026904
Following gene: NA
Centisome position: 99.93
GC content: 35.77
Gene sequence:
>1107_bases GTGTCATTTTCTAAGAAATTAAAACAACTTTTCACTTCTACCCCACCCAAAAACAATTGGGATGGACTTATAGAAACATA CAAAACCTGGTTACCAGTAAGTAATAAGACACCCATCATTACTTTAAAAGAAGGCGCAACTCCTCTTATTGAAGTCAATT CCATTTCTAATCGAATTGGAAATGGAGTAAAAGTATTTGTCAAATATGACGGTCTAAATCCGACTGGATCCTTCAAAGAC AGAGGAATGACTATGGCGATAAGTAAAGCTAAAGAAGCTGGGTGTGAAGCTGTAATTTGCGCAAGCACAGGTAATACTTC AGCCTCTGCAGCAGCTTATGCAAGCAAAGGAGGAATGAAATCCTTTGTTATTATTCCAGATGGATATGTAGCTCAAGGTA AACTAGCTCAAGCTTTAGTTTACGGAGCTGAAGTATTAGCTATTAAAGGGAATTTTGATAAAGCACTAGATATTGTTAGA GAACTATCTAATAAATATCCAATTACTTTAGTGAACTCGGTAAATCCTTACAGATTACAAGGACAAAAAACCGCAGCATT TGAGATAATAGAAAATCTTGGAAATGCACCTGATTGGTTATGCATTCCAATGGGAAATGCTGGAAATATAAGTGCTTACT GGATGGGATTTCAAGAATTTTTTCACGCTGGAAAATCAAAACATCTCCCAAGAATGATGGGTTTTCAAGCGAGTGGTTCT GCGCCTTTAGTCGAAGGTAAAAGTATCAGTAACCCTGAGACAATTGCTACAGCAATAAGAATTGGTAATCCCGTTAATAG AGAAAAAGCTCTTTTAGCAAAAGAATCAAGCAATGGTAGATTTTCTTCTGTATCAGATTCAGAAATAATCAACGCATATA AAATTCTTGGTAGAGAAGAAGGCATTTTTTGTGAGCCTGCAAGTGCAGCTTCTGTGGCTGGTTTATTAAAAATCAAAGAA GATGTCCCAAAAAATTCAACTATTGTTTGTGTTTTGACAGGGAATGGTCTAAAAGATCCTGATTGCGCAATAAAAAATAA TGACTCAATGTTTCATACGGGAGTTGAACCAGAAATAAGTTCAATAACAAAAATAATGGGCTTTTAA
Upstream 100 bases:
>100_bases CATTAAAAGAGTTAATCGAATTCTACGCAGATTCACCCTTTAAAAAGCTGAAAGATGGAAGGTCTAGCACTTAGATTGTT TACAATTGATTAGCTAAGTA
Downstream 100 bases:
>100_bases AAACATTCAAATATCCAAAAAAAAAACTGTCTGTTAATTTCGAAAGTTTTTGCTTCTGTTAACTGGGGAAAACCTATTAA AACTCATCAATAATTAATCT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSFSKKLKQLFTSTPPKNNWDGLIETYKTWLPVSNKTPIITLKEGATPLIEVNSISNRIGNGVKVFVKYDGLNPTGSFKD RGMTMAISKAKEAGCEAVICASTGNTSASAAAYASKGGMKSFVIIPDGYVAQGKLAQALVYGAEVLAIKGNFDKALDIVR ELSNKYPITLVNSVNPYRLQGQKTAAFEIIENLGNAPDWLCIPMGNAGNISAYWMGFQEFFHAGKSKHLPRMMGFQASGS APLVEGKSISNPETIATAIRIGNPVNREKALLAKESSNGRFSSVSDSEIINAYKILGREEGIFCEPASAASVAGLLKIKE DVPKNSTIVCVLTGNGLKDPDCAIKNNDSMFHTGVEPEISSITKIMGF
Sequences:
>Translated_368_residues MSFSKKLKQLFTSTPPKNNWDGLIETYKTWLPVSNKTPIITLKEGATPLIEVNSISNRIGNGVKVFVKYDGLNPTGSFKD RGMTMAISKAKEAGCEAVICASTGNTSASAAAYASKGGMKSFVIIPDGYVAQGKLAQALVYGAEVLAIKGNFDKALDIVR ELSNKYPITLVNSVNPYRLQGQKTAAFEIIENLGNAPDWLCIPMGNAGNISAYWMGFQEFFHAGKSKHLPRMMGFQASGS APLVEGKSISNPETIATAIRIGNPVNREKALLAKESSNGRFSSVSDSEIINAYKILGREEGIFCEPASAASVAGLLKIKE DVPKNSTIVCVLTGNGLKDPDCAIKNNDSMFHTGVEPEISSITKIMGF >Mature_367_residues SFSKKLKQLFTSTPPKNNWDGLIETYKTWLPVSNKTPIITLKEGATPLIEVNSISNRIGNGVKVFVKYDGLNPTGSFKDR GMTMAISKAKEAGCEAVICASTGNTSASAAAYASKGGMKSFVIIPDGYVAQGKLAQALVYGAEVLAIKGNFDKALDIVRE LSNKYPITLVNSVNPYRLQGQKTAAFEIIENLGNAPDWLCIPMGNAGNISAYWMGFQEFFHAGKSKHLPRMMGFQASGSA PLVEGKSISNPETIATAIRIGNPVNREKALLAKESSNGRFSSVSDSEIINAYKILGREEGIFCEPASAASVAGLLKIKED VPKNSTIVCVLTGNGLKDPDCAIKNNDSMFHTGVEPEISSITKIMGF
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367138, Length=304, Percent_Identity=26.9736842105263, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1790207, Length=148, Percent_Identity=31.7567567567568, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508781, Length=313, Percent_Identity=24.2811501597444, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 39432; Mature: 39300
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSKKLKQLFTSTPPKNNWDGLIETYKTWLPVSNKTPIITLKEGATPLIEVNSISNRIG CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHHCC NGVKVFVKYDGLNPTGSFKDRGMTMAISKAKEAGCEAVICASTGNTSASAAAYASKGGMK CCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCE SFVIIPDGYVAQGKLAQALVYGAEVLAIKGNFDKALDIVRELSNKYPITLVNSVNPYRLQ EEEEECCCCCCCCHHHHHHHHCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCEEEC GQKTAAFEIIENLGNAPDWLCIPMGNAGNISAYWMGFQEFFHAGKSKHLPRMMGFQASGS CCCHHHHHHHHHHCCCCCEEEEECCCCCCEEHEEECHHHHHHCCCCCCCCHHHCCCCCCC APLVEGKSISNPETIATAIRIGNPVNREKALLAKESSNGRFSSVSDSEIINAYKILGREE CCEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC GIFCEPASAASVAGLLKIKEDVPKNSTIVCVLTGNGLKDPDCAIKNNDSMFHTGVEPEIS CEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCEEECCCCCHHH SITKIMGF HHHHHHCC >Mature Secondary Structure SFSKKLKQLFTSTPPKNNWDGLIETYKTWLPVSNKTPIITLKEGATPLIEVNSISNRIG CHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHHCC NGVKVFVKYDGLNPTGSFKDRGMTMAISKAKEAGCEAVICASTGNTSASAAAYASKGGMK CCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCE SFVIIPDGYVAQGKLAQALVYGAEVLAIKGNFDKALDIVRELSNKYPITLVNSVNPYRLQ EEEEECCCCCCCCHHHHHHHHCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCEEEC GQKTAAFEIIENLGNAPDWLCIPMGNAGNISAYWMGFQEFFHAGKSKHLPRMMGFQASGS CCCHHHHHHHHHHCCCCCEEEEECCCCCCEEHEEECHHHHHHCCCCCCCCHHHCCCCCCC APLVEGKSISNPETIATAIRIGNPVNREKALLAKESSNGRFSSVSDSEIINAYKILGREE CCEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC GIFCEPASAASVAGLLKIKEDVPKNSTIVCVLTGNGLKDPDCAIKNNDSMFHTGVEPEIS CEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCEEECCCCCHHH SITKIMGF HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]