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The map label for this gene is recN [H]

Identifier: 124026902

GI number: 124026902

Start: 1859235

End: 1860920

Strand: Reverse

Name: recN [H]

Synonym: NATL1_21971

Alternate gene names: 124026902

Gene position: 1860920-1859235 (Counterclockwise)

Preceding gene: NA

Following gene: 124026901

Centisome position: 99.8

GC content: 29.72

Gene sequence:

>1686_bases
ATGTTAAACAGTCTTCGTTTTCAAAATATAGCTCTATTTGGGAATACAGAGATTGACTTTGAAAAGGGGTTTACTGCTTT
TACTGGGCAAACAGGTTCAGGTAAATCAATATTTATTGATACCTTAAATGCTTTATTAGCTAATAAAAAAACTCCTCTAG
ATAATCGATTAGTTGCCGAAGGTTCTCTCTGTTCATCAATTGAGGGGGTTTTTTCTGTACTCCAAAATACAAAAAATTGG
CTAATCAATCAAGAATTGGACATTGATGAAGAATTAATTGTGACAAGGGAATGGCGTTTAAAGGAAAATAAATATAAATC
TAGATTTAGAATTAATGGCGTAATAGTGAATAGAGATCAAATATCAGAATTGAGATCCCTTTTATTAGATTTTACTCTAC
AAGGTGATACCTATATTTTAAATAATTCATTGCATCAATTAAGTTTATTAGATTCTTTAGGTTTACATTTAATTAAGGAA
TCGATTACTAAGGTAAAGCAAAATTGGAATATATGGAATGACTCTAATTTTAGATTAGAGGAAGCACGAGTAAGAATTAC
GAATTCCAAAAAAGAGTTTGAGGAAATGCAATACATATATCAAGACTTAGATAAATTAGAATTAGAAGATCCTAACGAAC
AAATCAAGTTAGAGACTGATCAGAATCGTTTATCCAATATTCTAAGATTAAAAGAAGGCGTTAAATCATTGTTAACTCAT
TTAAATGAAAGTTTAGATGAGTATCCATCTATTTTAGACCATGCTGATTTCTGTATTAATGAATTAAAGAGTCTTTCTCA
AATTGACTCTTCTTTAGAACCTATTTCTGATTCTTTTTATACAATAACTAATAATCTTAACGATTTAATTTATCAAATTA
ATGATTACGAAAAAACATTAGATATTGATCCGTCTTTTTTAAATGATTTGCAAGTTAGATTATCTACTCTCAAATTTTAT
CAAAAAAAATATCAAAGAAATATATCAGATCTTATTCGGTATAAAAATGAATTATTCAATTCTTTATCTCTGCAAGAAAG
TTCTAATAATATTAATGATTATTCTTCTGATGAAAATAAAAAAAGAATTATAAGAGACAAATCTAATAAAGAGTTATCAG
TTATAAGAAAAAATATTGCTTCACAACTTGAAGAAAAATTGATTATTAGCTTAAAAAAATTAGGTATTCCTAATGTTCGT
TTTAAAGTCGTCTTTGAAGAATGTGAACCAACAATCAATGGTATTGATAAAGTCAACTTTATGTTTTCAGCAAATCCAGG
TATCCCTTTAGCGTCTCTTGCGGAAACAGCCTCTGGTGGAGAAAAGTCAAGGGTTCTTCTTGCAATAAAGGCAATATTTT
CTACATTTGAAAACTGCAATTTATTGATTTTCGATGAAATTGATTCGGGTGTTAGTGGATCAATTAGTAGTTACGTAGCT
AATTTGCTTTGTGAATTAGCAAATCATCGTCAAGTTTTTTGCGTGACTCATCAACCTTTAATTGCAGCATTTGCTGATAA
TCATTTTGCTTTAAAAAAGAGTGTTATCTCTGGTCACACAAAGTCTGATTTTATTAACTTAAGGGAAATCTCAGATAGGC
AAAGGGAATTGGCTTTATTGGCTGGCGGTGAAATTGTAGAAGCGAATGCTTATGCGGCGAGCTTGCTGGAACACAAGGCT
GCATGA

Upstream 100 bases:

>100_bases
TAAAATCGCTTAATTCTTCGGCCATTTTATTATGGCAATGTTCTACGTCTCTTCTAGTTCATTTTACTCTCAGTTTGCGT
CTTTTTGGTTGCTTTGATTT

Downstream 100 bases:

>100_bases
TGAGCATATCTTTTTATATAATTAACCATTAGTAATTTTCCCTAATGGGAAGTCCGAAACCTAATTCAAAAAAAAATGCA
TTAAATAATGGTTCTTCTAC

Product: DNA repair protein RecN, ABC transporter

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MLNSLRFQNIALFGNTEIDFEKGFTAFTGQTGSGKSIFIDTLNALLANKKTPLDNRLVAEGSLCSSIEGVFSVLQNTKNW
LINQELDIDEELIVTREWRLKENKYKSRFRINGVIVNRDQISELRSLLLDFTLQGDTYILNNSLHQLSLLDSLGLHLIKE
SITKVKQNWNIWNDSNFRLEEARVRITNSKKEFEEMQYIYQDLDKLELEDPNEQIKLETDQNRLSNILRLKEGVKSLLTH
LNESLDEYPSILDHADFCINELKSLSQIDSSLEPISDSFYTITNNLNDLIYQINDYEKTLDIDPSFLNDLQVRLSTLKFY
QKKYQRNISDLIRYKNELFNSLSLQESSNNINDYSSDENKKRIIRDKSNKELSVIRKNIASQLEEKLIISLKKLGIPNVR
FKVVFEECEPTINGIDKVNFMFSANPGIPLASLAETASGGEKSRVLLAIKAIFSTFENCNLLIFDEIDSGVSGSISSYVA
NLLCELANHRQVFCVTHQPLIAAFADNHFALKKSVISGHTKSDFINLREISDRQRELALLAGGEIVEANAYAASLLEHKA
A

Sequences:

>Translated_561_residues
MLNSLRFQNIALFGNTEIDFEKGFTAFTGQTGSGKSIFIDTLNALLANKKTPLDNRLVAEGSLCSSIEGVFSVLQNTKNW
LINQELDIDEELIVTREWRLKENKYKSRFRINGVIVNRDQISELRSLLLDFTLQGDTYILNNSLHQLSLLDSLGLHLIKE
SITKVKQNWNIWNDSNFRLEEARVRITNSKKEFEEMQYIYQDLDKLELEDPNEQIKLETDQNRLSNILRLKEGVKSLLTH
LNESLDEYPSILDHADFCINELKSLSQIDSSLEPISDSFYTITNNLNDLIYQINDYEKTLDIDPSFLNDLQVRLSTLKFY
QKKYQRNISDLIRYKNELFNSLSLQESSNNINDYSSDENKKRIIRDKSNKELSVIRKNIASQLEEKLIISLKKLGIPNVR
FKVVFEECEPTINGIDKVNFMFSANPGIPLASLAETASGGEKSRVLLAIKAIFSTFENCNLLIFDEIDSGVSGSISSYVA
NLLCELANHRQVFCVTHQPLIAAFADNHFALKKSVISGHTKSDFINLREISDRQRELALLAGGEIVEANAYAASLLEHKA
A
>Mature_561_residues
MLNSLRFQNIALFGNTEIDFEKGFTAFTGQTGSGKSIFIDTLNALLANKKTPLDNRLVAEGSLCSSIEGVFSVLQNTKNW
LINQELDIDEELIVTREWRLKENKYKSRFRINGVIVNRDQISELRSLLLDFTLQGDTYILNNSLHQLSLLDSLGLHLIKE
SITKVKQNWNIWNDSNFRLEEARVRITNSKKEFEEMQYIYQDLDKLELEDPNEQIKLETDQNRLSNILRLKEGVKSLLTH
LNESLDEYPSILDHADFCINELKSLSQIDSSLEPISDSFYTITNNLNDLIYQINDYEKTLDIDPSFLNDLQVRLSTLKFY
QKKYQRNISDLIRYKNELFNSLSLQESSNNINDYSSDENKKRIIRDKSNKELSVIRKNIASQLEEKLIISLKKLGIPNVR
FKVVFEECEPTINGIDKVNFMFSANPGIPLASLAETASGGEKSRVLLAIKAIFSTFENCNLLIFDEIDSGVSGSISSYVA
NLLCELANHRQVFCVTHQPLIAAFADNHFALKKSVISGHTKSDFINLREISDRQRELALLAGGEIVEANAYAASLLEHKA
A

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=567, Percent_Identity=28.3950617283951, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63931; Mature: 63931

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSLRFQNIALFGNTEIDFEKGFTAFTGQTGSGKSIFIDTLNALLANKKTPLDNRLVAE
CCCCCCCCEEEEECCCEEEHHCCCEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEC
GSLCSSIEGVFSVLQNTKNWLINQELDIDEELIVTREWRLKENKYKSRFRINGVIVNRDQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCHHHHCCEEEEEEEEECHHH
ISELRSLLLDFTLQGDTYILNNSLHQLSLLDSLGLHLIKESITKVKQNWNIWNDSNFRLE
HHHHHHHHHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
EARVRITNSKKEFEEMQYIYQDLDKLELEDPNEQIKLETDQNRLSNILRLKEGVKSLLTH
EEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LNESLDEYPSILDHADFCINELKSLSQIDSSLEPISDSFYTITNNLNDLIYQINDYEKTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHEEECCCCCEE
DIDPSFLNDLQVRLSTLKFYQKKYQRNISDLIRYKNELFNSLSLQESSNNINDYSSDENK
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
KRIIRDKSNKELSVIRKNIASQLEEKLIISLKKLGIPNVRFKVVFEECEPTINGIDKVNF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEE
MFSANPGIPLASLAETASGGEKSRVLLAIKAIFSTFENCNLLIFDEIDSGVSGSISSYVA
EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
NLLCELANHRQVFCVTHQPLIAAFADNHFALKKSVISGHTKSDFINLREISDRQRELALL
HHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHCCCCHHHCEEHHHHHHHHHHEEEE
AGGEIVEANAYAASLLEHKAA
ECCCEEECHHHHHHHHHHCCC
>Mature Secondary Structure
MLNSLRFQNIALFGNTEIDFEKGFTAFTGQTGSGKSIFIDTLNALLANKKTPLDNRLVAE
CCCCCCCCEEEEECCCEEEHHCCCEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEC
GSLCSSIEGVFSVLQNTKNWLINQELDIDEELIVTREWRLKENKYKSRFRINGVIVNRDQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCHHHHCCEEEEEEEEECHHH
ISELRSLLLDFTLQGDTYILNNSLHQLSLLDSLGLHLIKESITKVKQNWNIWNDSNFRLE
HHHHHHHHHHHEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
EARVRITNSKKEFEEMQYIYQDLDKLELEDPNEQIKLETDQNRLSNILRLKEGVKSLLTH
EEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LNESLDEYPSILDHADFCINELKSLSQIDSSLEPISDSFYTITNNLNDLIYQINDYEKTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHEEECCCCCEE
DIDPSFLNDLQVRLSTLKFYQKKYQRNISDLIRYKNELFNSLSLQESSNNINDYSSDENK
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
KRIIRDKSNKELSVIRKNIASQLEEKLIISLKKLGIPNVRFKVVFEECEPTINGIDKVNF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEE
MFSANPGIPLASLAETASGGEKSRVLLAIKAIFSTFENCNLLIFDEIDSGVSGSISSYVA
EEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
NLLCELANHRQVFCVTHQPLIAAFADNHFALKKSVISGHTKSDFINLREISDRQRELALL
HHHHHHHCCCEEEEEECCCHHHHHCCCCHHHHHHHHCCCCHHHCEEHHHHHHHHHHEEEE
AGGEIVEANAYAASLLEHKAA
ECCCEEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]