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The map label for this gene is pabC [H]

Identifier: 124026872

GI number: 124026872

Start: 1824589

End: 1825416

Strand: Direct

Name: pabC [H]

Synonym: NATL1_21671

Alternate gene names: 124026872

Gene position: 1824589-1825416 (Clockwise)

Preceding gene: 124026871

Following gene: 124026875

Centisome position: 97.85

GC content: 33.45

Gene sequence:

>828_bases
ATGACTGAAAATAAGAACGAAAAATTAGGATGGATTAATGGTCATTGGGGAGTCTTCAAAGATTTAAAAGTGCCAATTAA
TGATCGAGGTCTCAACTTTGCGGATGGCATCTTTGAAACGATTTTAATTTTGAATGGAATTCCACAGCTTCTAGATGAGC
ATTTAAATAGATGGGAAAAAAGTGCAAGTATCTTAGAAATGAATTCCCCACCATCGAAAGAATGGTTGATTTCACTCGTT
GAAGATGGCATTAATAGAGCAGAATTAAAGAACATCAATGGAGTCATTCGTATTAATTGGACCAGAGGAGAGTCCGAACA
ACGTGGAATTGATATCAGCAAGACAAGCCTTCATAGTTTTTGGTTGGAGATAGATTCTTTTCAACCAAATTTTGAACCTA
TATCTACAATAATCAGTCAAACCGAAAGAAGAAATTCTTTTAGCCGATTGAGTTCTTGTAAAACATTTTCCTATAACCAA
GGGATTCAAGCACGTATTGAAGCAAAAAATCTAGGCTTTAATGATGCACTATTATTAAATAGTCAAGGTGAAATATGTTG
TGCCACGACAGCAAATATATTAGTAAAAAGAGAAAATAATTGGTTAACTCCACCATCTAATAGTGGTTGTCTACCTGGCA
TAATGCGTCAACGAGGAATTGAGTTGAACATAATAAAAGAAGCTCTCATTGAAGCGACACCACAAGATAATGATGAATGG
TTTTTAATCAATAGTTTAAGTTGTCGTCCAATTCAAAAAATAAACAAAAAAGAATTAAAAATATCAACTAACCCCAAAGA
ATTTTGGCTGAGTTTGTTAAAAATCTAA

Upstream 100 bases:

>100_bases
TCAGTGCTCATGCTGGATGTGGAATTGTTGCAGATTCAGATAGTCAAAAGGAAGCTGAAGAAATGAATTGGAAATTGATG
CCACTTTTAAACGCATTAAC

Downstream 100 bases:

>100_bases
AAAATAATATCGGACATACTATCTATATAGGAATTGGAAATGTCACTTCAGCTGGCTTTGGAGAGCAAGCTTCTACTTGA
AAATCCACAACTGAACCTAT

Product: aminotransferases class-IV

Products: NA

Alternate protein names: BCAT; Transaminase B [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTENKNEKLGWINGHWGVFKDLKVPINDRGLNFADGIFETILILNGIPQLLDEHLNRWEKSASILEMNSPPSKEWLISLV
EDGINRAELKNINGVIRINWTRGESEQRGIDISKTSLHSFWLEIDSFQPNFEPISTIISQTERRNSFSRLSSCKTFSYNQ
GIQARIEAKNLGFNDALLLNSQGEICCATTANILVKRENNWLTPPSNSGCLPGIMRQRGIELNIIKEALIEATPQDNDEW
FLINSLSCRPIQKINKKELKISTNPKEFWLSLLKI

Sequences:

>Translated_275_residues
MTENKNEKLGWINGHWGVFKDLKVPINDRGLNFADGIFETILILNGIPQLLDEHLNRWEKSASILEMNSPPSKEWLISLV
EDGINRAELKNINGVIRINWTRGESEQRGIDISKTSLHSFWLEIDSFQPNFEPISTIISQTERRNSFSRLSSCKTFSYNQ
GIQARIEAKNLGFNDALLLNSQGEICCATTANILVKRENNWLTPPSNSGCLPGIMRQRGIELNIIKEALIEATPQDNDEW
FLINSLSCRPIQKINKKELKISTNPKEFWLSLLKI
>Mature_274_residues
TENKNEKLGWINGHWGVFKDLKVPINDRGLNFADGIFETILILNGIPQLLDEHLNRWEKSASILEMNSPPSKEWLISLVE
DGINRAELKNINGVIRINWTRGESEQRGIDISKTSLHSFWLEIDSFQPNFEPISTIISQTERRNSFSRLSSCKTFSYNQG
IQARIEAKNLGFNDALLLNSQGEICCATTANILVKRENNWLTPPSNSGCLPGIMRQRGIELNIIKEALIEATPQDNDEWF
LINSLSCRPIQKINKKELKISTNPKEFWLSLLKI

Specific function: Acts on leucine, isoleucine and valine [H]

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544
- InterPro:   IPR018300
- InterPro:   IPR005785 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: =2.6.1.42 [H]

Molecular weight: Translated: 31377; Mature: 31246

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENKNEKLGWINGHWGVFKDLKVPINDRGLNFADGIFETILILNGIPQLLDEHLNRWEK
CCCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SASILEMNSPPSKEWLISLVEDGINRAELKNINGVIRINWTRGESEQRGIDISKTSLHSF
CCCEEECCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHHHHE
WLEIDSFQPNFEPISTIISQTERRNSFSRLSSCKTFSYNQGIQARIEAKNLGFNDALLLN
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEC
SQGEICCATTANILVKRENNWLTPPSNSGCLPGIMRQRGIELNIIKEALIEATPQDNDEW
CCCCEEEEECEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCE
FLINSLSCRPIQKINKKELKISTNPKEFWLSLLKI
EEEECCCCCHHHHCCCCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
TENKNEKLGWINGHWGVFKDLKVPINDRGLNFADGIFETILILNGIPQLLDEHLNRWEK
CCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SASILEMNSPPSKEWLISLVEDGINRAELKNINGVIRINWTRGESEQRGIDISKTSLHSF
CCCEEECCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHHHHE
WLEIDSFQPNFEPISTIISQTERRNSFSRLSSCKTFSYNQGIQARIEAKNLGFNDALLLN
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEC
SQGEICCATTANILVKRENNWLTPPSNSGCLPGIMRQRGIELNIIKEALIEATPQDNDEW
CCCCEEEEECEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCE
FLINSLSCRPIQKINKKELKISTNPKEFWLSLLKI
EEEECCCCCHHHHCCCCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]