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The map label for this gene is 124026852

Identifier: 124026852

GI number: 124026852

Start: 1805313

End: 1805846

Strand: Reverse

Name: 124026852

Synonym: NATL1_21471

Alternate gene names: NA

Gene position: 1805846-1805313 (Counterclockwise)

Preceding gene: 124026853

Following gene: 124026846

Centisome position: 96.84

GC content: 38.39

Gene sequence:

>534_bases
ATGAGCTCATATAACAATCGTAATCAAATTCGTCAGCGATCTCGGGCACCTCTTGATCGCAGAATGGATAAATGGATACA
AACTGGGAAACAGGTTGTAGATGGTGTCGCAGGTAATCGCCCGGGTCAAAGAAGGGGAGGATGGCAAGATAAAGAGACTT
CAGCAAATTTCGATAAAGTTGGTCGTTGGATGGAAGAGAAAATTGATTGGTTTTTTGAGGATGATGACGATTGGTTGGAT
AATGAAGACTTAGATGATGAACCCTTTCAAGAAAGCTTAAACAATACAAAAAGACCCTTAACTGCTATTTCCTTAAGAGC
TCCTAAAGCCTTACCACCTCAGATTGAAGGAAGGAGAAATAATTCTGACGAACTGGATGAATGGCCAGACGATCAATCTT
TTAAATTAAATAAGTGGGAAAGAAAAGATAATTTAATTAAGCAAAATGCATCGGATTCAAACGATTCTCGTTTAGATGAA
CGAACTCCTCAAAGAAGAAAAAACATACCAAGATCTAGTCGAAGAAAGTACTAG

Upstream 100 bases:

>100_bases
AAAAATGTGTGCTTGAATTTCAACCTTTTTCTAGAAGTAAAAAATAATTTTCTTCTTTACGGTGATTCACTTGTTGGTTT
GAAAGCGTTAAATTTAAAAG

Downstream 100 bases:

>100_bases
TTTCTCAAAAAGCCTTCCTTGGAACTGGTCCAAGCCATTTTTCTAACTTTGGGCTAAATACTTCTCTGATTACAGTTAAT
TCTTTTTGTTGACGAAAAAA

Product: viral RNA helicase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSSYNNRNQIRQRSRAPLDRRMDKWIQTGKQVVDGVAGNRPGQRRGGWQDKETSANFDKVGRWMEEKIDWFFEDDDDWLD
NEDLDDEPFQESLNNTKRPLTAISLRAPKALPPQIEGRRNNSDELDEWPDDQSFKLNKWERKDNLIKQNASDSNDSRLDE
RTPQRRKNIPRSSRRKY

Sequences:

>Translated_177_residues
MSSYNNRNQIRQRSRAPLDRRMDKWIQTGKQVVDGVAGNRPGQRRGGWQDKETSANFDKVGRWMEEKIDWFFEDDDDWLD
NEDLDDEPFQESLNNTKRPLTAISLRAPKALPPQIEGRRNNSDELDEWPDDQSFKLNKWERKDNLIKQNASDSNDSRLDE
RTPQRRKNIPRSSRRKY
>Mature_176_residues
SSYNNRNQIRQRSRAPLDRRMDKWIQTGKQVVDGVAGNRPGQRRGGWQDKETSANFDKVGRWMEEKIDWFFEDDDDWLDN
EDLDDEPFQESLNNTKRPLTAISLRAPKALPPQIEGRRNNSDELDEWPDDQSFKLNKWERKDNLIKQNASDSNDSRLDER
TPQRRKNIPRSSRRKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21078; Mature: 20947

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYNNRNQIRQRSRAPLDRRMDKWIQTGKQVVDGVAGNRPGQRRGGWQDKETSANFDKV
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
GRWMEEKIDWFFEDDDDWLDNEDLDDEPFQESLNNTKRPLTAISLRAPKALPPQIEGRRN
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
NSDELDEWPDDQSFKLNKWERKDNLIKQNASDSNDSRLDERTPQRRKNIPRSSRRKY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
SSYNNRNQIRQRSRAPLDRRMDKWIQTGKQVVDGVAGNRPGQRRGGWQDKETSANFDKV
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
GRWMEEKIDWFFEDDDDWLDNEDLDDEPFQESLNNTKRPLTAISLRAPKALPPQIEGRRN
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
NSDELDEWPDDQSFKLNKWERKDNLIKQNASDSNDSRLDERTPQRRKNIPRSSRRKY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA