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The map label for this gene is 124026837

Identifier: 124026837

GI number: 124026837

Start: 1789836

End: 1790393

Strand: Direct

Name: 124026837

Synonym: NATL1_21321

Alternate gene names: NA

Gene position: 1789836-1790393 (Clockwise)

Preceding gene: 124026836

Following gene: 124026838

Centisome position: 95.98

GC content: 30.29

Gene sequence:

>558_bases
ATGATAGTTAATCTTCCTCAAACTTATTTAATAGGACTGTGTTTGCTTTTAGTAATTATTGCTATTTTAGTAGGAAGACA
ACTTTATAAAGTAAGAAAAGATGAAATGAAGCTAATCAAATTAGAAAAAGAAGATTCAAATACAAAAGAAGATTCAGCAA
AAATGTATGAATTGGCATCTGTTCAATTAAAGAAAAGATTATATCCTCAAGCTACATCAACCTTAAAACAGGCCTTAAAG
AAACTTGATGGGGAGCCAGAAGAAGCTAAAGCACTAATAGAAAATGCATTAGGCTTTGCACTCGCTGCTCAAAATGACTT
TAAATCAGCAGTTATTCATTACAAAAAAGCATTAACAGCAAAATCCGAATATCCAGTAGCTCTAAATAATCTCGGTTTTG
CTTATCAACGCTTGCTCAAAGAAGACGAAGCTTATAAAAATTATCAAGAGGTTTTAAAGTTAGATCCTAATAATAAAACT
GCGATCTCTCAAATTAAAAGACTTGAACGTATAGTTGGAAAAGATAAAGATAAATTATCGAATAAAAAAGGCTTCTAA

Upstream 100 bases:

>100_bases
TAAGATAAAAAAATACAGAAGAAATTCCAAAATTCAAGAATATGATAATAATAAATAATTACTATACAGTTAACAAATTT
TTTTATTTGAGTTTTAGTTG

Downstream 100 bases:

>100_bases
ATCATTATTAATCCATCATGTTTGAACCATGCAAAAAACAAATAAATTTCTAAAAATAGGAACTAAAGAGTTCAAAAGTC
GACTTCTTGTTGGAACTGGT

Product: putative photosystem I assembly related protein Ycf37

Products: NA

Alternate protein names: Photosystem I Assembly Related Protein Ycf; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Photosystem I Assembly Protein Ycf; Photosystem I Assembly Protein; TPR Domain-Containing Protein; Photosystem I Assembly Related Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIVNLPQTYLIGLCLLLVIIAILVGRQLYKVRKDEMKLIKLEKEDSNTKEDSAKMYELASVQLKKRLYPQATSTLKQALK
KLDGEPEEAKALIENALGFALAAQNDFKSAVIHYKKALTAKSEYPVALNNLGFAYQRLLKEDEAYKNYQEVLKLDPNNKT
AISQIKRLERIVGKDKDKLSNKKGF

Sequences:

>Translated_185_residues
MIVNLPQTYLIGLCLLLVIIAILVGRQLYKVRKDEMKLIKLEKEDSNTKEDSAKMYELASVQLKKRLYPQATSTLKQALK
KLDGEPEEAKALIENALGFALAAQNDFKSAVIHYKKALTAKSEYPVALNNLGFAYQRLLKEDEAYKNYQEVLKLDPNNKT
AISQIKRLERIVGKDKDKLSNKKGF
>Mature_185_residues
MIVNLPQTYLIGLCLLLVIIAILVGRQLYKVRKDEMKLIKLEKEDSNTKEDSAKMYELASVQLKKRLYPQATSTLKQALK
KLDGEPEEAKALIENALGFALAAQNDFKSAVIHYKKALTAKSEYPVALNNLGFAYQRLLKEDEAYKNYQEVLKLDPNNKT
AISQIKRLERIVGKDKDKLSNKKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21018; Mature: 21018

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNLPQTYLIGLCLLLVIIAILVGRQLYKVRKDEMKLIKLEKEDSNTKEDSAKMYELAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VQLKKRLYPQATSTLKQALKKLDGEPEEAKALIENALGFALAAQNDFKSAVIHYKKALTA
HHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSEYPVALNNLGFAYQRLLKEDEAYKNYQEVLKLDPNNKTAISQIKRLERIVGKDKDKLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHC
NKKGF
CCCCC
>Mature Secondary Structure
MIVNLPQTYLIGLCLLLVIIAILVGRQLYKVRKDEMKLIKLEKEDSNTKEDSAKMYELAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VQLKKRLYPQATSTLKQALKKLDGEPEEAKALIENALGFALAAQNDFKSAVIHYKKALTA
HHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSEYPVALNNLGFAYQRLLKEDEAYKNYQEVLKLDPNNKTAISQIKRLERIVGKDKDKLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHC
NKKGF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA