| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026804
Identifier: 124026804
GI number: 124026804
Start: 1742633
End: 1743379
Strand: Direct
Name: 124026804
Synonym: NATL1_20991
Alternate gene names: NA
Gene position: 1742633-1743379 (Clockwise)
Preceding gene: 124026803
Following gene: 124026805
Centisome position: 93.45
GC content: 29.99
Gene sequence:
>747_bases ATGGAAATCACTCAAGCCTTTTCAGAAGACAATATCTTAGTTCTTGAAAAGGCTAAATTATTACGTCCACTTATTAAATT TTATTTCATTGAGAAAGAATTATCGAACGTTCTAATAGATGATAATAAACTTGAAATTGAGATCGAAACTTTCCGAAATA TTAATAAGTTAAATTCCGAAGATGAGTTTTCTAATTTTTTGAATAGCAATAATTTAACTCCTGAAGGCTTTAATAAGAAA ATATTAAATCAGTTGAAAATCAATTCATTTAGTATTGAAAATTTTAGTAATAAATGTGAAGCAAGATTTCTTGAAAAAAG ATATCTTTTAGATGAAGTTACTTATAGTCTTTTACGAGTTGAAAATTTTTATAAAGCAAGAGAACTCAAAATAAGAATAC TCGAAAAGGAAGCAACTTTTTCCGACATGGCAATATCTTATTCAAATGGTTTTGAAAAGAAAAGCGGCGGTCTTATTGGT CCAACCTCTCTAATCAATGCTCATTCATCTTTAATTGATATTCTGCGCACAAGTAAAGAGGGAGACATCACAGGGCCTCA TAAAATTGAAAAATGGTATGTCATAGTTCGTCTTGAAAAATTTACACCCGCAAAACTTGATGAGGTAACACACAAAAAGA TGGCTCAAGAATTGTTTGAAGAATGGGTCAATGAGGCGGTTGATGAAATGCATAATGCAATAATTAAAACAAACAACTCT TCATTCCAAGAAAAAACAAATTCGTGA
Upstream 100 bases:
>100_bases GTTGCAGTATTTAAAACGGCTGAGTCAGCTTACGCTAAAGCATTGAAGAGTGAATTAGATAACATGAATTAAAATACTAT TTAATAATTAAATAGTAAAT
Downstream 100 bases:
>100_bases GTCAAAAACAAACTGGAACATCTATTAAAGATCTTCCTGCATTTAAAAATTTAAGTGACAAGAATTTTCAAGATTTTTTG GGAAAATGCAAAAAATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MEITQAFSEDNILVLEKAKLLRPLIKFYFIEKELSNVLIDDNKLEIEIETFRNINKLNSEDEFSNFLNSNNLTPEGFNKK ILNQLKINSFSIENFSNKCEARFLEKRYLLDEVTYSLLRVENFYKARELKIRILEKEATFSDMAISYSNGFEKKSGGLIG PTSLINAHSSLIDILRTSKEGDITGPHKIEKWYVIVRLEKFTPAKLDEVTHKKMAQELFEEWVNEAVDEMHNAIIKTNNS SFQEKTNS
Sequences:
>Translated_248_residues MEITQAFSEDNILVLEKAKLLRPLIKFYFIEKELSNVLIDDNKLEIEIETFRNINKLNSEDEFSNFLNSNNLTPEGFNKK ILNQLKINSFSIENFSNKCEARFLEKRYLLDEVTYSLLRVENFYKARELKIRILEKEATFSDMAISYSNGFEKKSGGLIG PTSLINAHSSLIDILRTSKEGDITGPHKIEKWYVIVRLEKFTPAKLDEVTHKKMAQELFEEWVNEAVDEMHNAIIKTNNS SFQEKTNS >Mature_248_residues MEITQAFSEDNILVLEKAKLLRPLIKFYFIEKELSNVLIDDNKLEIEIETFRNINKLNSEDEFSNFLNSNNLTPEGFNKK ILNQLKINSFSIENFSNKCEARFLEKRYLLDEVTYSLLRVENFYKARELKIRILEKEATFSDMAISYSNGFEKKSGGLIG PTSLINAHSSLIDILRTSKEGDITGPHKIEKWYVIVRLEKFTPAKLDEVTHKKMAQELFEEWVNEAVDEMHNAIIKTNNS SFQEKTNS
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28844; Mature: 28844
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITQAFSEDNILVLEKAKLLRPLIKFYFIEKELSNVLIDDNKLEIEIETFRNINKLNSE CCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCH DEFSNFLNSNNLTPEGFNKKILNQLKINSFSIENFSNKCEARFLEKRYLLDEVTYSLLRV HHHHHHHCCCCCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ENFYKARELKIRILEKEATFSDMAISYSNGFEKKSGGLIGPTSLINAHSSLIDILRTSKE HHHHHHHHHEEEEEECCCCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GDITGPHKIEKWYVIVRLEKFTPAKLDEVTHKKMAQELFEEWVNEAVDEMHNAIIKTNNS CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC SFQEKTNS CCHHCCCC >Mature Secondary Structure MEITQAFSEDNILVLEKAKLLRPLIKFYFIEKELSNVLIDDNKLEIEIETFRNINKLNSE CCCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCH DEFSNFLNSNNLTPEGFNKKILNQLKINSFSIENFSNKCEARFLEKRYLLDEVTYSLLRV HHHHHHHCCCCCCCCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ENFYKARELKIRILEKEATFSDMAISYSNGFEKKSGGLIGPTSLINAHSSLIDILRTSKE HHHHHHHHHEEEEEECCCCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC GDITGPHKIEKWYVIVRLEKFTPAKLDEVTHKKMAQELFEEWVNEAVDEMHNAIIKTNNS CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC SFQEKTNS CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA