| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is btuE [C]
Identifier: 124026789
GI number: 124026789
Start: 1727688
End: 1728164
Strand: Direct
Name: btuE [C]
Synonym: NATL1_20841
Alternate gene names: 124026789
Gene position: 1727688-1728164 (Clockwise)
Preceding gene: 124026786
Following gene: 124026794
Centisome position: 92.65
GC content: 34.8
Gene sequence:
>477_bases ATGTCCGTAAATATCAGCAAAGTGGAGGTCTTCTCTTTTAAAAATCAGAAAATAACTTTTGATCATTACAAAGGAAATGT CTTATTGATTGTCAATGTCGCAAGCAAGTGCGGGTTTACTAAGCAATATAAAGCTCTTCAGTATCTTCAGGATAAATATG AATCCAAAGGCTTCAAAGTTTTAGGCTTTCCTTGTAATGACTTTGGAAACCAAGAGCCTGGGCAATTAGAAGAAATAAAA GAGTTCTGTTCAACAACTTATGGAGTAACTTTCCAACTTTTCCAAAAAGTTCATGCCAAAGGCAAAACAACAGAACCATT TACTACTTTGAATCAATTAAGTCCATCCGGAGACGTTGAATGGAACTTTGAGAAATTTCTCATTAATACTGAGGGAGATG CGGTCTTAAGATTTAAAAGTTCAATAGAACCTGACAGTCCTGAAATCACACAAGCAATCGAAAAATTACTCGATTAA
Upstream 100 bases:
>100_bases ATTGAGTCTCACGAGATGCCCCTATTTCTTCGTTCATATTTGGAGCAGCAAGCCATTATTATTTTATGGCTAACTCCCGT TTTTTATCACTTCCATATCC
Downstream 100 bases:
>100_bases GCATTTAATTTCTTAGCAAAGATGTGGCCTAAAGCAATAGCTAAAACTCCCATAAGTACAATTGATATGGAGTTAAATAA AAACAATTTATACAGGCGTT
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSVNISKVEVFSFKNQKITFDHYKGNVLLIVNVASKCGFTKQYKALQYLQDKYESKGFKVLGFPCNDFGNQEPGQLEEIK EFCSTTYGVTFQLFQKVHAKGKTTEPFTTLNQLSPSGDVEWNFEKFLINTEGDAVLRFKSSIEPDSPEITQAIEKLLD
Sequences:
>Translated_158_residues MSVNISKVEVFSFKNQKITFDHYKGNVLLIVNVASKCGFTKQYKALQYLQDKYESKGFKVLGFPCNDFGNQEPGQLEEIK EFCSTTYGVTFQLFQKVHAKGKTTEPFTTLNQLSPSGDVEWNFEKFLINTEGDAVLRFKSSIEPDSPEITQAIEKLLD >Mature_157_residues SVNISKVEVFSFKNQKITFDHYKGNVLLIVNVASKCGFTKQYKALQYLQDKYESKGFKVLGFPCNDFGNQEPGQLEEIKE FCSTTYGVTFQLFQKVHAKGKTTEPFTTLNQLSPSGDVEWNFEKFLINTEGDAVLRFKSSIEPDSPEITQAIEKLLD
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=150, Percent_Identity=40.6666666666667, Blast_Score=111, Evalue=2e-25, Organism=Homo sapiens, GI192455698, Length=152, Percent_Identity=36.8421052631579, Blast_Score=101, Evalue=4e-22, Organism=Homo sapiens, GI75709200, Length=134, Percent_Identity=39.5522388059701, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI90903240, Length=134, Percent_Identity=39.5522388059701, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4557629, Length=149, Percent_Identity=37.5838926174497, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI90903238, Length=116, Percent_Identity=39.6551724137931, Blast_Score=88, Evalue=3e-18, Organism=Homo sapiens, GI6006001, Length=145, Percent_Identity=36.551724137931, Blast_Score=85, Evalue=3e-17, Organism=Homo sapiens, GI33186887, Length=145, Percent_Identity=36.551724137931, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI32967607, Length=172, Percent_Identity=33.7209302325581, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI41406084, Length=164, Percent_Identity=32.9268292682927, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788003, Length=163, Percent_Identity=40.4907975460123, Blast_Score=133, Evalue=5e-33, Organism=Caenorhabditis elegans, GI193210707, Length=150, Percent_Identity=40.6666666666667, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17506887, Length=163, Percent_Identity=37.4233128834356, Blast_Score=96, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71993584, Length=146, Percent_Identity=34.2465753424658, Blast_Score=96, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17535473, Length=147, Percent_Identity=34.6938775510204, Blast_Score=96, Evalue=8e-21, Organism=Caenorhabditis elegans, GI193209493, Length=180, Percent_Identity=30.5555555555556, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17550320, Length=181, Percent_Identity=27.6243093922652, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71993573, Length=82, Percent_Identity=37.8048780487805, Blast_Score=63, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319721, Length=162, Percent_Identity=45.0617283950617, Blast_Score=139, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322228, Length=149, Percent_Identity=46.3087248322148, Blast_Score=138, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6322826, Length=144, Percent_Identity=42.3611111111111, Blast_Score=118, Evalue=5e-28, Organism=Drosophila melanogaster, GI85726443, Length=142, Percent_Identity=39.4366197183099, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI24656772, Length=163, Percent_Identity=34.3558282208589, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI24656777, Length=163, Percent_Identity=34.3558282208589, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI24656767, Length=163, Percent_Identity=34.3558282208589, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17969; Mature: 17837
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNISKVEVFSFKNQKITFDHYKGNVLLIVNVASKCGFTKQYKALQYLQDKYESKGFKV CCCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE LGFPCNDFGNQEPGQLEEIKEFCSTTYGVTFQLFQKVHAKGKTTEPFTTLNQLSPSGDVE EEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCE WNFEKFLINTEGDAVLRFKSSIEPDSPEITQAIEKLLD ECEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SVNISKVEVFSFKNQKITFDHYKGNVLLIVNVASKCGFTKQYKALQYLQDKYESKGFKV CCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE LGFPCNDFGNQEPGQLEEIKEFCSTTYGVTFQLFQKVHAKGKTTEPFTTLNQLSPSGDVE EEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCE WNFEKFLINTEGDAVLRFKSSIEPDSPEITQAIEKLLD ECEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]