| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026739
Identifier: 124026739
GI number: 124026739
Start: 1677646
End: 1678959
Strand: Reverse
Name: 124026739
Synonym: NATL1_20341
Alternate gene names: NA
Gene position: 1678959-1677646 (Counterclockwise)
Preceding gene: 124026741
Following gene: 124026738
Centisome position: 90.04
GC content: 38.36
Gene sequence:
>1314_bases TTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGAAAATGAAAGTTTCATTTCCAATTCAAATCGTATCAGTCAAGC CGAACAAAATCCTTTGTTTCTTTGTAATGGACATGGAGAAGACATGATTGCATGCAGGGTTATAGAAGCTCTCCATGAAA TGAATCCAAATATCTCCCAAGAAGTTCTCCCAATGGTTGGAGATGGGAAAGCATTTTTAAAGCATGTAAAAAATGGTTGG CTTGCAAAGATTGGCACCTCAATATTTTTGCCAAGCGGAGGATTTAGTAATCAGAGTTTTAGTGGTTTGGTTTTAGATTT AAAAGCTGGATTGTTAGGAAGTCTTTGGGTTCAATGGACTTTGACTCAGAGAGCAGCCAAAGAAGGAAAAATTATCGTTG CAGTTGGAGATTTATTACCTCTTCTTTTTGCATGGGCTAGTGGGGCAAATTATTTTTTTATTGGCACTCCTAAAAGTGAT TACACATGGGCCAGTGGTCCAAGATCCGCTTTAAGTGATTGTTACCATCGATTGAAAGGAACTGAGTGGGATCCATGGGA ATATTGGTTAATGCGATCTAGTCGATGCAAGATGGTTGCAGTAAGAGACAAAATCACTGCTAGAGGTTTGAGAAATCACG GTGTAAAGGCACTGTCCCTGGGAAATCCAATGATGGATGGAATTTCTAAAAGAGAATGTCCTAATGACTTTAAAAGATAT AGGCGTTTGATTTTGTTATGTGGAAGTCGTTTGCCTGAGGCGTATCAGAATTTTAAAAAACTTTTAATTGCAATCCAGTT TATTCGAATTAAATCTTCCATTGCAGTCTTTGTTCCTTTAAGTTCTTCTGCAATGAGAAAAAAAATAGCATTAATATTGA TGGACTTAGGCTTTAAATCTACTTATCAATCAACAGGTCAAAATGGGATTTCAGAAATATGGAAAAAAAACTCATTACTT ATATTGATTGGCTTTAACCAATTTTCTTATTGGGCTAAGTGGGGAGAAGTAGGAGTAGCTAATGCAGGTACAGCTACAGA ACAAGTAGTAGGTTTAGGAATCCCATGCGTTTCCTTGCCAGCAAAAGGACACCAATTTAATTTCAATTTTGCTAAGCGTC AAAGTCGTTTATTAGGAGGATCGGTGGCTATTGCTAAGAGTTATGAAACTCTCGCAAAACAAGTAGAGTTTTTACTGAAC TCTGATTTTGATAGAGAGATTATTGGCTTAAGAGGGGCTCAAAGAATGGGTCCAGAGGGCGGAAGTCACTCTATAGCACT TAGTATTTCGAATCACTTGTCCCAGGGCTCATAG
Upstream 100 bases:
>100_bases TACTCGCTACACATGGAGCATTTTGCTAGGGGTCTTCTGCAGGAAAATTAAACGAATAATAATTAAGGCGGCACCCAGAT TCGAACTGGGGATAAAGGAT
Downstream 100 bases:
>100_bases TGAGGTGTAATCTAGTAAAAGATTTTTTATGAAGATTTTCTATTCAAGCTTCTGCATATGCCACTAATTGAAGATCATCA TTATCTTAAAATTTGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MQSSALPLGHAAENESFISNSNRISQAEQNPLFLCNGHGEDMIACRVIEALHEMNPNISQEVLPMVGDGKAFLKHVKNGW LAKIGTSIFLPSGGFSNQSFSGLVLDLKAGLLGSLWVQWTLTQRAAKEGKIIVAVGDLLPLLFAWASGANYFFIGTPKSD YTWASGPRSALSDCYHRLKGTEWDPWEYWLMRSSRCKMVAVRDKITARGLRNHGVKALSLGNPMMDGISKRECPNDFKRY RRLILLCGSRLPEAYQNFKKLLIAIQFIRIKSSIAVFVPLSSSAMRKKIALILMDLGFKSTYQSTGQNGISEIWKKNSLL ILIGFNQFSYWAKWGEVGVANAGTATEQVVGLGIPCVSLPAKGHQFNFNFAKRQSRLLGGSVAIAKSYETLAKQVEFLLN SDFDREIIGLRGAQRMGPEGGSHSIALSISNHLSQGS
Sequences:
>Translated_437_residues MQSSALPLGHAAENESFISNSNRISQAEQNPLFLCNGHGEDMIACRVIEALHEMNPNISQEVLPMVGDGKAFLKHVKNGW LAKIGTSIFLPSGGFSNQSFSGLVLDLKAGLLGSLWVQWTLTQRAAKEGKIIVAVGDLLPLLFAWASGANYFFIGTPKSD YTWASGPRSALSDCYHRLKGTEWDPWEYWLMRSSRCKMVAVRDKITARGLRNHGVKALSLGNPMMDGISKRECPNDFKRY RRLILLCGSRLPEAYQNFKKLLIAIQFIRIKSSIAVFVPLSSSAMRKKIALILMDLGFKSTYQSTGQNGISEIWKKNSLL ILIGFNQFSYWAKWGEVGVANAGTATEQVVGLGIPCVSLPAKGHQFNFNFAKRQSRLLGGSVAIAKSYETLAKQVEFLLN SDFDREIIGLRGAQRMGPEGGSHSIALSISNHLSQGS >Mature_437_residues MQSSALPLGHAAENESFISNSNRISQAEQNPLFLCNGHGEDMIACRVIEALHEMNPNISQEVLPMVGDGKAFLKHVKNGW LAKIGTSIFLPSGGFSNQSFSGLVLDLKAGLLGSLWVQWTLTQRAAKEGKIIVAVGDLLPLLFAWASGANYFFIGTPKSD YTWASGPRSALSDCYHRLKGTEWDPWEYWLMRSSRCKMVAVRDKITARGLRNHGVKALSLGNPMMDGISKRECPNDFKRY RRLILLCGSRLPEAYQNFKKLLIAIQFIRIKSSIAVFVPLSSSAMRKKIALILMDLGFKSTYQSTGQNGISEIWKKNSLL ILIGFNQFSYWAKWGEVGVANAGTATEQVVGLGIPCVSLPAKGHQFNFNFAKRQSRLLGGSVAIAKSYETLAKQVEFLLN SDFDREIIGLRGAQRMGPEGGSHSIALSISNHLSQGS
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48107; Mature: 48107
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSALPLGHAAENESFISNSNRISQAEQNPLFLCNGHGEDMIACRVIEALHEMNPNISQ CCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH EVLPMVGDGKAFLKHVKNGWLAKIGTSIFLPSGGFSNQSFSGLVLDLKAGLLGSLWVQWT HHHCCCCCCHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCCEEEEEHHCHHHHHHHEEE LTQRAAKEGKIIVAVGDLLPLLFAWASGANYFFIGTPKSDYTWASGPRSALSDCYHRLKG EHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCC TEWDPWEYWLMRSSRCKMVAVRDKITARGLRNHGVKALSLGNPMMDGISKRECPNDFKRY CCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHCCEEEEECCCHHHHCCCHHCCCHHHHHH RRLILLCGSRLPEAYQNFKKLLIAIQFIRIKSSIAVFVPLSSSAMRKKIALILMDLGFKS HHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHHHCCCCH TYQSTGQNGISEIWKKNSLLILIGFNQFSYWAKWGEVGVANAGTATEQVVGLGIPCVSLP HHHHCCCHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECC AKGHQFNFNFAKRQSRLLGGSVAIAKSYETLAKQVEFLLNSDFDREIIGLRGAQRMGPEG CCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCCC GSHSIALSISNHLSQGS CCCEEEEEECCCCCCCC >Mature Secondary Structure MQSSALPLGHAAENESFISNSNRISQAEQNPLFLCNGHGEDMIACRVIEALHEMNPNISQ CCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCH EVLPMVGDGKAFLKHVKNGWLAKIGTSIFLPSGGFSNQSFSGLVLDLKAGLLGSLWVQWT HHHCCCCCCHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCCEEEEEHHCHHHHHHHEEE LTQRAAKEGKIIVAVGDLLPLLFAWASGANYFFIGTPKSDYTWASGPRSALSDCYHRLKG EHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCC TEWDPWEYWLMRSSRCKMVAVRDKITARGLRNHGVKALSLGNPMMDGISKRECPNDFKRY CCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHCCEEEEECCCHHHHCCCHHCCCHHHHHH RRLILLCGSRLPEAYQNFKKLLIAIQFIRIKSSIAVFVPLSSSAMRKKIALILMDLGFKS HHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHHHCCCCH TYQSTGQNGISEIWKKNSLLILIGFNQFSYWAKWGEVGVANAGTATEQVVGLGIPCVSLP HHHHCCCHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECC AKGHQFNFNFAKRQSRLLGGSVAIAKSYETLAKQVEFLLNSDFDREIIGLRGAQRMGPEG CCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCCC GSHSIALSISNHLSQGS CCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA