Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026735

Identifier: 124026735

GI number: 124026735

Start: 1675910

End: 1676467

Strand: Reverse

Name: 124026735

Synonym: NATL1_20301

Alternate gene names: NA

Gene position: 1676467-1675910 (Counterclockwise)

Preceding gene: 124026738

Following gene: 124026734

Centisome position: 89.9

GC content: 39.96

Gene sequence:

>558_bases
ATGCAATCGGCATTCTCCTCAACTTTGTTTCTTACTATCCTATTGGCAATAGGTTTGGGATTCTTTTTGCGAGCTGCTAG
TAAGGACCGCACAACAATTGTAGATGTTCAGTCCCCTTTGCCTCCCCTAGAAGTTTTGAAAGGCATTAGTTTTTGGTTGG
AAGAACGTGGTTGGAAAAAAAATGGAGGCAATGTTGAAGAGAAATTGTTGATCTTTAGTGGCAATGTTGCTTCTAGTGCT
TTTTTGGTGATCTTTTTATCTTGCCTAGGAGGAGTGGGCTCAGCCTGTTTAGGCCTTGTTCTAATTCAGCTTTATCCCTC
TTTGAGCTGGTGGCCTTTGCTACTAGCTGCTATTGGTGCACCTCTGGCTGGAATTATTTATCGTATTAAATCCAAACGAG
AGGAATCATTAGAAGTTAAGTTGTTAAGTTCAGATCTATCTGATATGAGCATTTTACGAATCAAAGCTCATCGTGATGAG
CTGATAGCAATTCAGTTGGAATTATCTGAAAGTCTTGAGCTTAGTAGCGAAAACTCTCTACTTTCTTCTCCTATTTGA

Upstream 100 bases:

>100_bases
TCAACGATGTTATGTGTTCAAAAATCTTTTGATTTCTTTAGCTCACTTTTGTAGCTATGTTCTCCAGAACAATTAAAATA
AAAATGATCGTATTTTTGAG

Downstream 100 bases:

>100_bases
TTAGTATTAGTGTTAAGAAATAAAGTATTAGATAGTTTAAAATTAATAGTTTTTTTACTTGCTTTTTATACGTTTGCTCA
ACTTTATTACACTAGGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQSAFSSTLFLTILLAIGLGFFLRAASKDRTTIVDVQSPLPPLEVLKGISFWLEERGWKKNGGNVEEKLLIFSGNVASSA
FLVIFLSCLGGVGSACLGLVLIQLYPSLSWWPLLLAAIGAPLAGIIYRIKSKREESLEVKLLSSDLSDMSILRIKAHRDE
LIAIQLELSESLELSSENSLLSSPI

Sequences:

>Translated_185_residues
MQSAFSSTLFLTILLAIGLGFFLRAASKDRTTIVDVQSPLPPLEVLKGISFWLEERGWKKNGGNVEEKLLIFSGNVASSA
FLVIFLSCLGGVGSACLGLVLIQLYPSLSWWPLLLAAIGAPLAGIIYRIKSKREESLEVKLLSSDLSDMSILRIKAHRDE
LIAIQLELSESLELSSENSLLSSPI
>Mature_185_residues
MQSAFSSTLFLTILLAIGLGFFLRAASKDRTTIVDVQSPLPPLEVLKGISFWLEERGWKKNGGNVEEKLLIFSGNVASSA
FLVIFLSCLGGVGSACLGLVLIQLYPSLSWWPLLLAAIGAPLAGIIYRIKSKREESLEVKLLSSDLSDMSILRIKAHRDE
LIAIQLELSESLELSSENSLLSSPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20133; Mature: 20133

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSAFSSTLFLTILLAIGLGFFLRAASKDRTTIVDVQSPLPPLEVLKGISFWLEERGWKK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
NGGNVEEKLLIFSGNVASSAFLVIFLSCLGGVGSACLGLVLIQLYPSLSWWPLLLAAIGA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PLAGIIYRIKSKREESLEVKLLSSDLSDMSILRIKAHRDELIAIQLELSESLELSSENSL
HHHHHHHHHHHCCCHHHEEEEHHCCCCCHHEEEEEECCCCEEEEEEECCCCCCCCCCCCC
LSSPI
CCCCC
>Mature Secondary Structure
MQSAFSSTLFLTILLAIGLGFFLRAASKDRTTIVDVQSPLPPLEVLKGISFWLEERGWKK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
NGGNVEEKLLIFSGNVASSAFLVIFLSCLGGVGSACLGLVLIQLYPSLSWWPLLLAAIGA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PLAGIIYRIKSKREESLEVKLLSSDLSDMSILRIKAHRDELIAIQLELSESLELSSENSL
HHHHHHHHHHHCCCHHHEEEEHHCCCCCHHEEEEEECCCCEEEEEEECCCCCCCCCCCCC
LSSPI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA