| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is tyrA [H]
Identifier: 124026715
GI number: 124026715
Start: 1653570
End: 1654445
Strand: Direct
Name: tyrA [H]
Synonym: NATL1_20101
Alternate gene names: 124026715
Gene position: 1653570-1654445 (Clockwise)
Preceding gene: 124026712
Following gene: 124026717
Centisome position: 88.68
GC content: 35.96
Gene sequence:
>876_bases ATGGAGCTTAAAACAAAACCATCTGAAAATATTGGAATTGTGGGATTAGGTCTAATTGGAGGTTCCTTAGGCTTAGATCT CCAAAAGCTTGGATATACAGTTTATGGAATTACTCATCGAGAAAAAACTGCACAAATAGCTAGAGAAAGAAAACTAGCCC AAATTATTAGTACTGATCTGAGTGTATTAAAACATTGTTCTCTTATTTATATTGCTTTACCACTTGAACAACTCCTAAAT CCTTCATCAGCTTTAATCAATGCCATTCCGAGGAATGCTGTTGTTACTGATGTTGGATCTGTAAAAGTCCCTATTTTAAA TACTTGGAACAAGTTACATCCGCGTTTTGTAGCCAGTCATCCAATGACAGGAACGGAAGAATCTGGTGTTAACGCAGGTC AACATAATTTATTTAAAAATAAGCCCTGGGTCGTTACTCCAAATAAAGAAACTGATAAAAAAGCCCTCGAAATAGTTCGC CAAATTACTTTTTCACTTGGGAGTCAATGGATAAGCTCTGAAGCTCAAATACATGATGAAGCAGTTGGCTTGATTTCACA TTTACCAGTTCTAATTAGCGCGGCATTACTCAATACACTCAGTACAGATGTAAAGCCTTCCTTATATTCACTGGCAAAAA GTATTGCATCCAGTGGGTTTGCTGACACCTCTAGGGTTGGAGGTGGAAACCCAGAGCTAGGAGTCTCCATGGCAAAATTG AACAAAAAAAATATAGAGAGACATTTAGCCTCTTATAGACATTCTCTAGATCTTTTTGAAAAATATTTACTTGAAGAGAA CTGGAGTGAACTCGAGAAAATACTAGTTAATACACAGGAAGAAAGACAAAATTTCATTTTAAAACCTACTAATTAA
Upstream 100 bases:
>100_bases ATGTTTATGTGAATTCACCTCAAGCATTAGTAGGACCTTTTATCAAAAAAATCTCTTAATCATATTGCCCTATCAATAAA TATATAGAACAATACTATTT
Downstream 100 bases:
>100_bases AGACAGGGATGTTTAGATGTCTACCTTTAGATTCCAATAATTGTCTTACAACCATCAAAGCTGATTGACTTACGCCAGCG GTACCTTCACCAGGGTATAT
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MELKTKPSENIGIVGLGLIGGSLGLDLQKLGYTVYGITHREKTAQIARERKLAQIISTDLSVLKHCSLIYIALPLEQLLN PSSALINAIPRNAVVTDVGSVKVPILNTWNKLHPRFVASHPMTGTEESGVNAGQHNLFKNKPWVVTPNKETDKKALEIVR QITFSLGSQWISSEAQIHDEAVGLISHLPVLISAALLNTLSTDVKPSLYSLAKSIASSGFADTSRVGGGNPELGVSMAKL NKKNIERHLASYRHSLDLFEKYLLEENWSELEKILVNTQEERQNFILKPTN
Sequences:
>Translated_291_residues MELKTKPSENIGIVGLGLIGGSLGLDLQKLGYTVYGITHREKTAQIARERKLAQIISTDLSVLKHCSLIYIALPLEQLLN PSSALINAIPRNAVVTDVGSVKVPILNTWNKLHPRFVASHPMTGTEESGVNAGQHNLFKNKPWVVTPNKETDKKALEIVR QITFSLGSQWISSEAQIHDEAVGLISHLPVLISAALLNTLSTDVKPSLYSLAKSIASSGFADTSRVGGGNPELGVSMAKL NKKNIERHLASYRHSLDLFEKYLLEENWSELEKILVNTQEERQNFILKPTN >Mature_291_residues MELKTKPSENIGIVGLGLIGGSLGLDLQKLGYTVYGITHREKTAQIARERKLAQIISTDLSVLKHCSLIYIALPLEQLLN PSSALINAIPRNAVVTDVGSVKVPILNTWNKLHPRFVASHPMTGTEESGVNAGQHNLFKNKPWVVTPNKETDKKALEIVR QITFSLGSQWISSEAQIHDEAVGLISHLPVLISAALLNTLSTDVKPSLYSLAKSIASSGFADTSRVGGGNPELGVSMAKL NKKNIERHLASYRHSLDLFEKYLLEENWSELEKILVNTQEERQNFILKPTN
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 32001; Mature: 32001
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKTKPSENIGIVGLGLIGGSLGLDLQKLGYTVYGITHREKTAQIARERKLAQIISTDL CCCCCCCCCCCCEEEEHHHCCCCCCCHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHH SVLKHCSLIYIALPLEQLLNPSSALINAIPRNAVVTDVGSVKVPILNTWNKLHPRFVASH HHHHHHHHHHEEECHHHHHCHHHHHHHHCCCCCEEECCCCEEECHHHCHHHHCCCCEECC PMTGTEESGVNAGQHNLFKNKPWVVTPNKETDKKALEIVRQITFSLGSQWISSEAQIHDE CCCCCCCCCCCCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AVGLISHLPVLISAALLNTLSTDVKPSLYSLAKSIASSGFADTSRVGGGNPELGVSMAKL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHH NKKNIERHLASYRHSLDLFEKYLLEENWSELEKILVNTQEERQNFILKPTN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MELKTKPSENIGIVGLGLIGGSLGLDLQKLGYTVYGITHREKTAQIARERKLAQIISTDL CCCCCCCCCCCCEEEEHHHCCCCCCCHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHH SVLKHCSLIYIALPLEQLLNPSSALINAIPRNAVVTDVGSVKVPILNTWNKLHPRFVASH HHHHHHHHHHEEECHHHHHCHHHHHHHHCCCCCEEECCCCEEECHHHCHHHHCCCCEECC PMTGTEESGVNAGQHNLFKNKPWVVTPNKETDKKALEIVRQITFSLGSQWISSEAQIHDE CCCCCCCCCCCCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AVGLISHLPVLISAALLNTLSTDVKPSLYSLAKSIASSGFADTSRVGGGNPELGVSMAKL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHH NKKNIERHLASYRHSLDLFEKYLLEENWSELEKILVNTQEERQNFILKPTN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]