Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026673

Identifier: 124026673

GI number: 124026673

Start: 1624766

End: 1624936

Strand: Reverse

Name: 124026673

Synonym: NATL1_19681

Alternate gene names: NA

Gene position: 1624936-1624766 (Counterclockwise)

Preceding gene: 124026674

Following gene: 124026672

Centisome position: 87.14

GC content: 35.09

Gene sequence:

>171_bases
GTGATATTCAAATCAAATCAAGGTAAATCCTTTACAAAAGAAGAAGCAATAGATCTAATGGTTTCATTGAGTGCAACTGA
CGCAAATTCAGAAAAGAAGTGGAGAGGTTTCTACAACTCTTTATCGCAGAAAGAACTTCAGGATGAATGGGATGAGTATT
GGAAACCTTAA

Upstream 100 bases:

>100_bases
AGATGGTTTGATCTTTAGTGGTATCAGGAGAGGTGATTTTAAATTGATACCATTCAAGGAACTGTCTTCAGGTGATCCTT
GGGAAGAGATTGCTTCGTAA

Downstream 100 bases:

>100_bases
TTTTTGTATTAAGAAAGGGACCCTGCTGCTTCAGCGACCTTGAGACCCTCACTTCATTTTGAAGGTATATTTTAGACAGT
AATTGTGCTCCTTAAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MIFKSNQGKSFTKEEAIDLMVSLSATDANSEKKWRGFYNSLSQKELQDEWDEYWKP

Sequences:

>Translated_56_residues
MIFKSNQGKSFTKEEAIDLMVSLSATDANSEKKWRGFYNSLSQKELQDEWDEYWKP
>Mature_56_residues
MIFKSNQGKSFTKEEAIDLMVSLSATDANSEKKWRGFYNSLSQKELQDEWDEYWKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6636; Mature: 6636

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKSNQGKSFTKEEAIDLMVSLSATDANSEKKWRGFYNSLSQKELQDEWDEYWKP
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFKSNQGKSFTKEEAIDLMVSLSATDANSEKKWRGFYNSLSQKELQDEWDEYWKP
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA