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The map label for this gene is amiC [H]

Identifier: 124026624

GI number: 124026624

Start: 1579224

End: 1580501

Strand: Reverse

Name: amiC [H]

Synonym: NATL1_19191

Alternate gene names: 124026624

Gene position: 1580501-1579224 (Counterclockwise)

Preceding gene: 124026625

Following gene: 124026623

Centisome position: 84.76

GC content: 41.55

Gene sequence:

>1278_bases
ATGAAGCTTTCAAAGCGCATTTTTGCAGGTTTAGCTACTGCCTCTTTAGCCGTAACTGTTACTGCTTGTGGTGGATCAGA
TTCCTCTGGCAACTTTGATGACACCGTAACTGTTGGAATTCTCCATTCTCTTTCAGGGACAATGGCAATCTCCGAATCAA
CTCTTGTTGATACAGAGAAAATGGCTATTGAGGAAATCAATGCAGCTGGCGGTGTAACAGTCGACGGTAAAAGCTATAAA
ATTGAATACATCGTTGAAGATGGTGCCTCAGATTGGCCTACCTTTGCAGAGAAATCCAAGAAGTTAATCGACCAAGATGG
AGTACCAGTAGTCTTTGGCGGCTGGACTTCTGCAAGTCGAAAGGCAATGCTTCCAGTTTATGAATCAAAGGATGCATTCC
TTTATTACCCAATTCAATATGAAGCACAAGAGTGCTCCAATAACATTTTCTATACAGGAGCGACTCCAAATCAGCAGTCT
GAGCCTGCTACTGATTTCATGTATAAGCGCTCACCAGCTGCTGGAGGAGATTTCTTCTTAGTTGGTTCTGACTATGTTTT
CCCAAGAACTTCTAACACAATTACTAAAGCTCAAGTGAAACAACTTGGAGGTAAAGTTGTTGGAGAAGATTATCTTCCTT
TAGGTAATACAGAGGTGGCACCTATTATCTCGAAGATAAAAGTTGCTCTTCCTGATGGTGGAATCATCGTTAACACTTTG
AATGGCGACCAAAACGTTGCTTTCTTCAAACAAATCCAGGACGCAGGAATTACTCCTTCTAATGGTTATTACGTAATGAA
CTACTCCATTGCGGAAGAAGAGATTAGTACGATTGGACCTGAGTTCCTTGAGGGCCACTATGGTGCTTGGAACTACATGA
TGTCTATTGATACTCCAGCTTCTAAGAAATTTGCTAAGAGCTTTAAGAAGAGATGGGGTAGTGATCGTGTTGTAGCTGAT
CCTCAAGAATCTGCTTATAACATGGTTTATCTTTGGAAGCAGGCAGTTGAAGATGCAGGTACATTTGATGACAATGCGGT
TAGAGAAGCATTGGTTGGTCAGACATTCGATGCTCCTCAGGGTCCAGTAGAAGTGATGGCAAATCATCACTTATCTCAAA
CAGTGAGAATCGGTGAAATCAATGCAGAGGGTGGATTTACAATCCTTGAAGAAACTGGAGTAGTTGAGCCACAAGCATGG
AACCAAAAACATCCAAGTTCAAAAGGTTACGCTTGTGATTGGACTGATCCTAAGAAAGGTGAAAAATATAAGATGTGA

Upstream 100 bases:

>100_bases
ATAGCTGAAACAGTCTTAGTTGCTACAAAAAGAGGGGTGTTCAGTTGGATACTTTTCCTAAACCCCAAGGTGGGCAAACA
ACTAATTTAGTTAGTAATTC

Downstream 100 bases:

>100_bases
TTCAATTTCTGACTTATAAATAGATTCTAATAAGGAGCCTTCGGGCTCCTTATTTCTTTAAAAAAACAAACAAGCTAGTG
CAACTTTTTCTTGAAAGCCT

Product: putative urea ABC transporter, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKLSKRIFAGLATASLAVTVTACGGSDSSGNFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVDGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKVALPDGGIIVNTL
NGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGSDRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQTFDAPQGPVEVMANHHLSQTVRIGEINAEGGFTILEETGVVEPQAW
NQKHPSSKGYACDWTDPKKGEKYKM

Sequences:

>Translated_425_residues
MKLSKRIFAGLATASLAVTVTACGGSDSSGNFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVDGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKVALPDGGIIVNTL
NGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGSDRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQTFDAPQGPVEVMANHHLSQTVRIGEINAEGGFTILEETGVVEPQAW
NQKHPSSKGYACDWTDPKKGEKYKM
>Mature_425_residues
MKLSKRIFAGLATASLAVTVTACGGSDSSGNFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVDGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKVALPDGGIIVNTL
NGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGSDRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQTFDAPQGPVEVMANHHLSQTVRIGEINAEGGFTILEETGVVEPQAW
NQKHPSSKGYACDWTDPKKGEKYKM

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46236; Mature: 46236

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKRIFAGLATASLAVTVTACGGSDSSGNFDDTVTVGILHSLSGTMAISESTLVDTEK
CCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHCCCCEEECCCCCCCHHH
MAIEEINAAGGVTVDGKSYKIEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASR
HHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCC
KAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQSEPATDFMYKRSPAAGGDFFL
CEECEEEECCCCEEEEEEEEEHHHHCCCEEEECCCCCCCCCCCHHHHEECCCCCCCCEEE
VGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKVALPDGGIIVNTL
ECCCEECCCCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHEEEEEECCCCEEEEEC
NGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPA
CCCCCHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCHHHHCCCCCEEEEEEEECCCC
SKKFAKSFKKRWGSDRVVADPQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQTFDAPQ
HHHHHHHHHHHCCCCCEEECCHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
GPVEVMANHHLSQTVRIGEINAEGGFTILEETGVVEPQAWNQKHPSSKGYACDWTDPKKG
CHHHHHHCCCCHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
EKYKM
CCCCC
>Mature Secondary Structure
MKLSKRIFAGLATASLAVTVTACGGSDSSGNFDDTVTVGILHSLSGTMAISESTLVDTEK
CCCHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHCCCCEEECCCCCCCHHH
MAIEEINAAGGVTVDGKSYKIEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASR
HHHHHHHCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCC
KAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQSEPATDFMYKRSPAAGGDFFL
CEECEEEECCCCEEEEEEEEEHHHHCCCEEEECCCCCCCCCCCHHHHEECCCCCCCCEEE
VGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKVALPDGGIIVNTL
ECCCEECCCCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHEEEEEECCCCEEEEEC
NGDQNVAFFKQIQDAGITPSNGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPA
CCCCCHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCHHHHCCCCCEEEEEEEECCCC
SKKFAKSFKKRWGSDRVVADPQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQTFDAPQ
HHHHHHHHHHHCCCCCEEECCHHHHCCCCEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
GPVEVMANHHLSQTVRIGEINAEGGFTILEETGVVEPQAWNQKHPSSKGYACDWTDPKKG
CHHHHHHCCCCHHEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
EKYKM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]