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The map label for this gene is urtC [C]

Identifier: 124026622

GI number: 124026622

Start: 1576858

End: 1577985

Strand: Reverse

Name: urtC [C]

Synonym: NATL1_19171

Alternate gene names: 124026622

Gene position: 1577985-1576858 (Counterclockwise)

Preceding gene: 124026623

Following gene: 124026621

Centisome position: 84.62

GC content: 35.2

Gene sequence:

>1128_bases
ATGAGCATTTTTTCTACAAAAAAAAGTTGGATTCAGTTAACTATTTGGGTGCTAATCATTGCATTAATTATTGCTGCTCC
TTCATTACTTCCTGTTTTTAGATTAAATCTCTTAGGTAGATATCTATCTCTTGCAATAGTGGCTCTAGGAGTTGATTTGA
TTTGGGGATTTACAGGAATGTTGAGCTTAGGGCAAGGAATTTTCTTTGCTCTTGGTGGATATTGCGCTGCAATGTTCCTC
CAATTGAATAGTTCAGGACAATTTCCAAATGGTATCCCTGAGTTTTTTGGTTTATATGGAGTCGAAAAACTTCCATTTTT
CTGGGAACCTTTTAAAAGTTCAATTTTTACTCTTATTTCCATTTGGTTGCTACCAGCAATAATTGCTGGTCTTCTAGGTT
ATTTAGTTTTTAGAAATAGAATTAAAGGTGTTTATTTTTCGATCCTTACACAAGCGGCTCTTTTAGTTTTTTTCAATTTC
TTTAATGGTCAACAGAAATTGATTAATGGAACAAATGGTTTAAAAACAGACGTGACTCAACTTTTTGGACAAATGGTAGG
TTCTGAAATAATGCAAAGATGGTTCTTTTGGGTATCAGCTATTTTAGTGATACTTGCATGGTTTTTTGCGAGGTGGATTG
TTCGAGATAGATTTGGAAATATCCTTATTGGAATTAGAGATGATGAAGCTCGAGTTCGTTTCACTGGATATAATCCAGTA
ATTTTTAAAACAATAATTTTCTCAATAGCAGGAGGATTAGCTGGTATTTCAGGAGCTTTGTACACAGTTCAATCTGGAAT
AGTTTCTCCTCAATTTATGACTGTCCCGTTCTCTATCGAAATGGTTGTTTGGGTTGCTGTTGGGGGCAGAGGAACTTTGC
TAGGTGCAATTCTTGGAGCCGTATTTATCAATTATGCAAAAAGTTTAGTGAGTGAAGCATTACCTGCAAGCTGGATGTTT
ATTCAAGGTGGATTATTTATTCTTGTTGTAACTGCTCTCCCAGAAGGGGTACTTGGATGGATCCGAAAAGGAGGTCTAAA
AAAATTACTCTTTTTAATCGGAATTAATAAAAAACTGGAGACATACCCAAGTCTTGAAGTTAATGAACAAGGTGAGGTGA
AATCATGA

Upstream 100 bases:

>100_bases
TATGGCTAGAGTAATGATATTTGCACTAATAGTCATATTCTTGCAATTCCGACCAACTGGGATGTTCCCTCAAAAAGGAA
GAATGGTGGAGTCTTAATTT

Downstream 100 bases:

>100_bases
GTTCTCCATTGCTAGAGCTAAAAAAAATCTCAGTTAGCTTTGAAGGATTTCTTGCTCTTAGAGATCTTGATCTGGTTTTG
AATAAAGGCGATCTTAGAGC

Product: putative membrane protein of urea ABC transport system

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: Inner-Membrane Translocator; Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; Urea ABC Transporter Permease UrtC; Amino Acid Or Sugar ABC Transport System Permease Protein; ABC Transporter ; Branched Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease; ABC Transporter; ABC-Type Urea Transport System Permease Protein II; Urea ABC Transporter Permease; Permease Of ABC Transporter; ABC Transporter Membrane Spanning Protein; Urea Or Short-Chain Amide ABC Transporter; Urea Or Short-Chain Amide ABC Transporter Permease Protein; Amide-Urea Transport System Permease Protein; Branched-Chain Amino Acid Transport Permease; Branched Chain Amino Acid ABC Transporter Permease Protein; Amide-Urea Transporter Permease Protein; Transmembrane Component Of ABC Transporter; High-Affinity Branched-Chain Amino Acid Transport System; Urea/Short Chain-Amide ABC Transporter Permease Protein; Urea ABC Transporter Permease Protein; ABC Transporter Related Protein; ABC Transporter Membrane Protein; Branched-Chain Amino Acid Transporter; Urea Transport System Permease Protein; ABC Transporter Inner-Membrane Translocator; ABC-Type Transport System Permease Protein; ABC Transporter-Like Protein; Integral Membrane Protein; Urea ABC Transporter Inner-Membrane Subunit UrtC; ABC Branched Amino Acid Transporter Permease Component; ABC-Type Branched-Chain Amino Acid Transport System; Branched-Chain Amino Acid Transport System Permease; Permease Protein Of ABC Transporter; Urea Transport System Permease Component Protein; Permease Component Of ABC Transporter; Urea/Short Chain-Amides ABC Transporter Permease; Permease Transporter Transmembrane Protein; Urea ABC Transport Permease Component UrtC

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFRLNLLGRYLSLAIVALGVDLIWGFTGMLSLGQGIFFALGGYCAAMFL
QLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSIFTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNF
FNGQQKLINGTNGLKTDVTQLFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFTGYNPV
IFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLGAILGAVFINYAKSLVSEALPASWMF
IQGGLFILVVTALPEGVLGWIRKGGLKKLLFLIGINKKLETYPSLEVNEQGEVKS

Sequences:

>Translated_375_residues
MSIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFRLNLLGRYLSLAIVALGVDLIWGFTGMLSLGQGIFFALGGYCAAMFL
QLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSIFTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNF
FNGQQKLINGTNGLKTDVTQLFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFTGYNPV
IFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLGAILGAVFINYAKSLVSEALPASWMF
IQGGLFILVVTALPEGVLGWIRKGGLKKLLFLIGINKKLETYPSLEVNEQGEVKS
>Mature_374_residues
SIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFRLNLLGRYLSLAIVALGVDLIWGFTGMLSLGQGIFFALGGYCAAMFLQ
LNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSIFTLISIWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNFF
NGQQKLINGTNGLKTDVTQLFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFTGYNPVI
FKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLGAILGAVFINYAKSLVSEALPASWMFI
QGGLFILVVTALPEGVLGWIRKGGLKKLLFLIGINKKLETYPSLEVNEQGEVKS

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789865, Length=319, Percent_Identity=26.6457680250784, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41462; Mature: 41331

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFRLNLLGRYLSLAIVALGVDLIWGFTGM
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLGQGIFFALGGYCAAMFLQLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSIFTLIS
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHH
LFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFTGYNPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHH
IFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLGAILGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCCHHHHHHHHHH
VFINYAKSLVSEALPASWMFIQGGLFILVVTALPEGVLGWIRKGGLKKLLFLIGINKKLE
HHHHHHHHHHHHHCCCCHHHECCCHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCHHH
TYPSLEVNEQGEVKS
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIFSTKKSWIQLTIWVLIIALIIAAPSLLPVFRLNLLGRYLSLAIVALGVDLIWGFTGM
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLGQGIFFALGGYCAAMFLQLNSSGQFPNGIPEFFGLYGVEKLPFFWEPFKSSIFTLIS
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IWLLPAIIAGLLGYLVFRNRIKGVYFSILTQAALLVFFNFFNGQQKLINGTNGLKTDVTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHH
LFGQMVGSEIMQRWFFWVSAILVILAWFFARWIVRDRFGNILIGIRDDEARVRFTGYNPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHH
IFKTIIFSIAGGLAGISGALYTVQSGIVSPQFMTVPFSIEMVVWVAVGGRGTLLGAILGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEEEEEECCCHHHHHHHHHH
VFINYAKSLVSEALPASWMFIQGGLFILVVTALPEGVLGWIRKGGLKKLLFLIGINKKLE
HHHHHHHHHHHHHCCCCHHHECCCHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCHHH
TYPSLEVNEQGEVKS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA