| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026608
Identifier: 124026608
GI number: 124026608
Start: 1565931
End: 1566335
Strand: Direct
Name: 124026608
Synonym: NATL1_19031
Alternate gene names: NA
Gene position: 1565931-1566335 (Clockwise)
Preceding gene: 124026605
Following gene: 124026610
Centisome position: 83.98
GC content: 41.23
Gene sequence:
>405_bases ATGAATACAAGCAAGCCTGACATCACTAAGAGACAACAACAGCTTCTCAATGAACTCAAAAAATGTACTGATGAGTTGAG TGGACAAGAACTGCATAGAAAACTTCATAATGGTGAAAAGGCAATGGGTTTAACGACTGTATACAGGAACTTGCAAGCGT TAGTAAAGCAAGGCTTGATACGATCGAGGCACCTCCCGAACGGCGAGGTCTTTTATGCCCCAGTTGAAAGAGATATTCAT CATTTAACTTGCGTAAGCTGTGGAGAAACCACACGCTTGAAGGGATGTCCGGTCAAAATGATGGATCTGTCGAAAAACAC CTCCAAAAACTTTGAGCTTTTGTTTCATACTCTTGAGTACTTTGGTCTCTGCCAAACTTGTTCTCAACAATTGAATGCTG GATAA
Upstream 100 bases:
>100_bases AGTTATCAGAAGAGGAATTATCCACCAATTTGTATTGATAAAAGACATTATGCAAATGATTCAGTATGTTCATTAAAGAG ATCAAATTAAGATCTTACTA
Downstream 100 bases:
>100_bases GAGTATTTGAATATGAATCAAACCTATAACTTCCACCTCAAATAATTAATTGAACTAAGTTTTTCTTGAACTTCCTGAGG GCTACCAGAAGCCAAAATAA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric Uptake Regulator Family Protein; Ferric Uptake Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Fur Family Ferric Uptake Regulator; Zinc Uptake Regulator; Ferric Uptake Regulator Family; Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Ferric Uptake Regulator Furb; Transcriptional Regulator FUR Family; Zinc Uptake Regulation Protein Zur; Metal Uptake Regulation Protein; Ferric Uptake Regulation Protein FurB; Fe2+/Zn2+ Uptake Regulation Protein; Metal Uptake Regulator Ferric Uptake Regulator Protein; Fe(3+) Uptake Regulation Protein; Zinc Uptake Regulator Fur Family; Fe2Zn2/ Uptake Regulation Protein; Transcriptional Regulator Fur Family; Ferric Uptake Regulatory Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNTSKPDITKRQQQLLNELKKCTDELSGQELHRKLHNGEKAMGLTTVYRNLQALVKQGLIRSRHLPNGEVFYAPVERDIH HLTCVSCGETTRLKGCPVKMMDLSKNTSKNFELLFHTLEYFGLCQTCSQQLNAG
Sequences:
>Translated_134_residues MNTSKPDITKRQQQLLNELKKCTDELSGQELHRKLHNGEKAMGLTTVYRNLQALVKQGLIRSRHLPNGEVFYAPVERDIH HLTCVSCGETTRLKGCPVKMMDLSKNTSKNFELLFHTLEYFGLCQTCSQQLNAG >Mature_134_residues MNTSKPDITKRQQQLLNELKKCTDELSGQELHRKLHNGEKAMGLTTVYRNLQALVKQGLIRSRHLPNGEVFYAPVERDIH HLTCVSCGETTRLKGCPVKMMDLSKNTSKNFELLFHTLEYFGLCQTCSQQLNAG
Specific function: Unknown
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15247; Mature: 15247
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSKPDITKRQQQLLNELKKCTDELSGQELHRKLHNGEKAMGLTTVYRNLQALVKQGLI CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RSRHLPNGEVFYAPVERDIHHLTCVSCGETTRLKGCPVKMMDLSKNTSKNFELLFHTLEY HHCCCCCCCEEEECCHHCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH FGLCQTCSQQLNAG HHHHHHHHHHHCCC >Mature Secondary Structure MNTSKPDITKRQQQLLNELKKCTDELSGQELHRKLHNGEKAMGLTTVYRNLQALVKQGLI CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RSRHLPNGEVFYAPVERDIHHLTCVSCGETTRLKGCPVKMMDLSKNTSKNFELLFHTLEY HHCCCCCCCEEEECCHHCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHH FGLCQTCSQQLNAG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA