Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026584

Identifier: 124026584

GI number: 124026584

Start: 1536197

End: 1537006

Strand: Reverse

Name: 124026584

Synonym: NATL1_18791

Alternate gene names: NA

Gene position: 1537006-1536197 (Counterclockwise)

Preceding gene: 124026585

Following gene: 124026583

Centisome position: 82.43

GC content: 38.52

Gene sequence:

>810_bases
ATGAGTGATGTAAATCAAAATCTAAGTAAAGAAGGGTTGGCAAATTTGGCCATAGACCCTGATCTATTGGCTCGAGAACT
AGCTGCTCAGTTAGCTGGGGATCCTTTAGATGAAATTGAACTAGATAAAACTGATGAAGATCTAGTGAATTCATCAAAAG
AGTGTGATATTGCATTGAAATGGCTTCAATCTGGAGATGAAGAAAGACTTCAAGGCCTAAGAGTTTTTTGTGAACACAGG
GATTCTAGAGCTCTCCCATTTTTACTCCCTTTACTTGACGAACCCTCTCCAGTTGTGAGGATGAGCGCTGTTTATGCTTT
AGGTAGAAATCCTTGTCCACAAGCTATTGACCTTCTATTGCATTTATTGAGATTCGATAGTAATGCCTATGTGCGAAAAG
CTACTGCTTGGAGTCTTGGAAATTACTCAAATGCCCCCGTTCTAGAACCTCTGATTAATGCTTTAAAACAAGATGTTGCT
GCTGTTCGACTTTGGGCATCCAGTTCTCTAGCAGAGGTTGGCCTCAATTCATCAGAAAGCTCTTTACCAGCAGCAAATCA
ATTACTTGAAAGTTTACAAATTGATGGTGAACCAATAGTTAGGAGTAACTGTGTTTGGTCTCTTGGTCGCCTTTACATTC
ATTTGAGTGAGGAAATCAAAATTCAAATAGTAGAGGCTTTTATTTCTGTTTTATTGAATGACCGTGAGCCTTCTGTCAGG
TATGAAGCAAGGACAGCTTTGGAGCAATTGGACAATCAAGAGGTACAAAAAAAATTAAAATCATTAATTGATGATGGTCA
ATTGGTTTAA

Upstream 100 bases:

>100_bases
TGGTATCGCTTTGTTTGCAGTCAGTGCTCGTATATGGCTGCCTGGGGATATGCTTGCACCAGCACCAATTAATTAAGCTT
GCTCTTCTTCAGTCAGAGCT

Downstream 100 bases:

>100_bases
TTTTTGGTACGAAAACAATTCGTTGTAATTAATAATTCGCGTTTCTAGTGTTTTTTTCTATATCATGCGTGACTTAGGGC
CTCACTCTTTCATGCCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHR
DSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVA
AVRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR
YEARTALEQLDNQEVQKKLKSLIDDGQLV

Sequences:

>Translated_269_residues
MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHR
DSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVA
AVRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR
YEARTALEQLDNQEVQKKLKSLIDDGQLV
>Mature_268_residues
SDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHRD
SRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAA
VRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVRY
EARTALEQLDNQEVQKKLKSLIDDGQLV

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29835; Mature: 29704

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALK
CCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCHHHHHH
WLQSGDEERLQGLRVFCEHRDSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLL
HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
HLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAAVRLWASSSLAEVGLNSSES
HHHHCCCCCCEEEHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
SLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCHH
YEARTALEQLDNQEVQKKLKSLIDDGQLV
HHHHHHHHHHCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALK
CCHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCHHHHHH
WLQSGDEERLQGLRVFCEHRDSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLL
HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
HLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAAVRLWASSSLAEVGLNSSES
HHHHCCCCCCEEEHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
SLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCHH
YEARTALEQLDNQEVQKKLKSLIDDGQLV
HHHHHHHHHHCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA