| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026584
Identifier: 124026584
GI number: 124026584
Start: 1536197
End: 1537006
Strand: Reverse
Name: 124026584
Synonym: NATL1_18791
Alternate gene names: NA
Gene position: 1537006-1536197 (Counterclockwise)
Preceding gene: 124026585
Following gene: 124026583
Centisome position: 82.43
GC content: 38.52
Gene sequence:
>810_bases ATGAGTGATGTAAATCAAAATCTAAGTAAAGAAGGGTTGGCAAATTTGGCCATAGACCCTGATCTATTGGCTCGAGAACT AGCTGCTCAGTTAGCTGGGGATCCTTTAGATGAAATTGAACTAGATAAAACTGATGAAGATCTAGTGAATTCATCAAAAG AGTGTGATATTGCATTGAAATGGCTTCAATCTGGAGATGAAGAAAGACTTCAAGGCCTAAGAGTTTTTTGTGAACACAGG GATTCTAGAGCTCTCCCATTTTTACTCCCTTTACTTGACGAACCCTCTCCAGTTGTGAGGATGAGCGCTGTTTATGCTTT AGGTAGAAATCCTTGTCCACAAGCTATTGACCTTCTATTGCATTTATTGAGATTCGATAGTAATGCCTATGTGCGAAAAG CTACTGCTTGGAGTCTTGGAAATTACTCAAATGCCCCCGTTCTAGAACCTCTGATTAATGCTTTAAAACAAGATGTTGCT GCTGTTCGACTTTGGGCATCCAGTTCTCTAGCAGAGGTTGGCCTCAATTCATCAGAAAGCTCTTTACCAGCAGCAAATCA ATTACTTGAAAGTTTACAAATTGATGGTGAACCAATAGTTAGGAGTAACTGTGTTTGGTCTCTTGGTCGCCTTTACATTC ATTTGAGTGAGGAAATCAAAATTCAAATAGTAGAGGCTTTTATTTCTGTTTTATTGAATGACCGTGAGCCTTCTGTCAGG TATGAAGCAAGGACAGCTTTGGAGCAATTGGACAATCAAGAGGTACAAAAAAAATTAAAATCATTAATTGATGATGGTCA ATTGGTTTAA
Upstream 100 bases:
>100_bases TGGTATCGCTTTGTTTGCAGTCAGTGCTCGTATATGGCTGCCTGGGGATATGCTTGCACCAGCACCAATTAATTAAGCTT GCTCTTCTTCAGTCAGAGCT
Downstream 100 bases:
>100_bases TTTTTGGTACGAAAACAATTCGTTGTAATTAATAATTCGCGTTTCTAGTGTTTTTTTCTATATCATGCGTGACTTAGGGC CTCACTCTTTCATGCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHR DSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVA AVRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR YEARTALEQLDNQEVQKKLKSLIDDGQLV
Sequences:
>Translated_269_residues MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHR DSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVA AVRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR YEARTALEQLDNQEVQKKLKSLIDDGQLV >Mature_268_residues SDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALKWLQSGDEERLQGLRVFCEHRD SRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLLHLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAA VRLWASSSLAEVGLNSSESSLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVRY EARTALEQLDNQEVQKKLKSLIDDGQLV
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29835; Mature: 29704
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALK CCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCHHHHHH WLQSGDEERLQGLRVFCEHRDSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLL HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH HLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAAVRLWASSSLAEVGLNSSES HHHHCCCCCCEEEHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC SLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCHH YEARTALEQLDNQEVQKKLKSLIDDGQLV HHHHHHHHHHCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDVNQNLSKEGLANLAIDPDLLARELAAQLAGDPLDEIELDKTDEDLVNSSKECDIALK CCHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCCHHHHHH WLQSGDEERLQGLRVFCEHRDSRALPFLLPLLDEPSPVVRMSAVYALGRNPCPQAIDLLL HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH HLLRFDSNAYVRKATAWSLGNYSNAPVLEPLINALKQDVAAVRLWASSSLAEVGLNSSES HHHHCCCCCCEEEHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC SLPAANQLLESLQIDGEPIVRSNCVWSLGRLYIHLSEEIKIQIVEAFISVLLNDREPSVR CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCHH YEARTALEQLDNQEVQKKLKSLIDDGQLV HHHHHHHHHHCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA