| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026582
Identifier: 124026582
GI number: 124026582
Start: 1535510
End: 1535902
Strand: Reverse
Name: 124026582
Synonym: NATL1_18771
Alternate gene names: NA
Gene position: 1535902-1535510 (Counterclockwise)
Preceding gene: 124026583
Following gene: 124026581
Centisome position: 82.37
GC content: 36.64
Gene sequence:
>393_bases ATGTCACATTTCAGCACAGTAAAAACCCAGCTTCGTAAAAAAGAGTTTCTAAAACAAGCTCTTATTGACTTAGGTTATGT ACCTAACGAAGGTGAAAATTTGGTTAGAGGTTACAGAGGTCAAACAGTTAAGGCTCAAATGACTGTTGAGATGAGTAAGG GAGCAGATATTGGATTTCGTTGGAATGAAGGGTCAAAATCATATGAACTAGTAACTGATCTTGACCTCTGGAAACAATCA ATACCAATAGAAAGATTCTTAGCTCAAGTCACTCAGCGTTATGCTCTTAATACTGTTCTTAATTCAACAGCTAGAGAGGG ATTTCAAGTATCTGAGCAAAAACAAAATATAGACGGATCAATAGAACTAGTTGTTACTCGCTGGGATTCTTAG
Upstream 100 bases:
>100_bases TTGAGGATGCCTTAGGCACCGTTGAGAGAAGAGAACCAACCTCCGATACCTTTCTTCGTGAAAAGGTTCAAAAACAGACT ATTTCTGCAGAAATTCACTG
Downstream 100 bases:
>100_bases GACTTTTTTGAAAATTGACTTTTGATCCTAGAGCTGCTTTTGAAACTAGGTCTATTGAATATCAGCCATCAAATGGTATT TATGATCCAAATCTTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSHFSTVKTQLRKKEFLKQALIDLGYVPNEGENLVRGYRGQTVKAQMTVEMSKGADIGFRWNEGSKSYELVTDLDLWKQS IPIERFLAQVTQRYALNTVLNSTAREGFQVSEQKQNIDGSIELVVTRWDS
Sequences:
>Translated_130_residues MSHFSTVKTQLRKKEFLKQALIDLGYVPNEGENLVRGYRGQTVKAQMTVEMSKGADIGFRWNEGSKSYELVTDLDLWKQS IPIERFLAQVTQRYALNTVLNSTAREGFQVSEQKQNIDGSIELVVTRWDS >Mature_129_residues SHFSTVKTQLRKKEFLKQALIDLGYVPNEGENLVRGYRGQTVKAQMTVEMSKGADIGFRWNEGSKSYELVTDLDLWKQSI PIERFLAQVTQRYALNTVLNSTAREGFQVSEQKQNIDGSIELVVTRWDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14889; Mature: 14758
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFSTVKTQLRKKEFLKQALIDLGYVPNEGENLVRGYRGQTVKAQMTVEMSKGADIGFR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCEE WNEGSKSYELVTDLDLWKQSIPIERFLAQVTQRYALNTVLNSTAREGFQVSEQKQNIDGS ECCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCE IELVVTRWDS EEEEEEECCC >Mature Secondary Structure SHFSTVKTQLRKKEFLKQALIDLGYVPNEGENLVRGYRGQTVKAQMTVEMSKGADIGFR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCEE WNEGSKSYELVTDLDLWKQSIPIERFLAQVTQRYALNTVLNSTAREGFQVSEQKQNIDGS ECCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCE IELVVTRWDS EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA