| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026580
Identifier: 124026580
GI number: 124026580
Start: 1533834
End: 1535060
Strand: Reverse
Name: 124026580
Synonym: NATL1_18751
Alternate gene names: NA
Gene position: 1535060-1533834 (Counterclockwise)
Preceding gene: 124026581
Following gene: 124026578
Centisome position: 82.32
GC content: 36.92
Gene sequence:
>1227_bases GTGCCAATAAATAAAGATAGTAAAAACAATTCAATTCCTAGAAGAAGATTTGGGCGAACTGAGATTCAGATACCAGTCTT ATCTTTGGGAGGGATGCGCTTTCAACAAAGCTGGAAGGATTTAGATCCTAAAGAGATCAATAATCAACAGCAAGACATCT TGCAAAAAATAATTAACCATGCTGCTAAAAATGGTATGCATCATATAGAAACTGCTCGTCATTATGGAACATCAGAACGC CAGATAGGCTGGGCCTTCGATCAAATCGATGACCCAAAAAGAATATTACAAACGAAAGTACCACCAAATAATGATCCTTC GATATTCGAGCAAGAACTTGAGTTAAGTATGAGTAGATTAAATTCCAAAAAAATTGATTTATTAGCTATTCATGGTATCA ACCTTCCTGAGCACTTGGATATGACTATTCGTCCTAATGGATGTCTACAGATTGTTCGTCGTTGGCAAAAAGATGGTCTT ATTGGTCATGTTGGCTTCTCAACTCATGCAAACGTTGACCTGATAATTAAAACAATTGAAACAGGGCTTTTTGATTATGT TAATTTGCATTGGTATTTTATTCGTCAGGAAAACGAAAGAGCTTTGCAAGCAGCGGATGCTAATGATATGGGGGTTTTTA TTATAAGTCCTACTGATAAGGGAGGTCATTTACATACACCGTCATTGAAACTTTTAGATTTATGTAGTCCTTTGCATCCA ATAGAATTTAATGATCTATTTTGTTTGAGGGATCAAAGAGTTCATACATTAAGTGTTGGAGCCTCAATTCCTGAAGATCT GGATATTCATTTAAGTGCGATTTCTAAAATTGACACCATGCATGGGGTAATTAATACCATTGAAAAGCGACTAATAAATG CCTCGTATAAATCGCTTGGAGAGTCATGGTTGACTACTTGGAATATAGGTCTACCTCGCTGGGATCAAACTCCAGGAGAG ATAAATATACCTACTTTATTATGGCTAAACAATTTATTAGAGGCTTGGGATATGGAAAGCTTTGTTAAAGATCGTTATGG TCTTTTAGGGAGAGGGGGACATTGGTTCCCAGGGGCAAACGCAGATTGCTTGGATTGTGAAGTGAGTGAGGATGACTTGA AAAAAGTTTTGATTAATAGCCCTTGGAGCTCTGAAATACCTTCTGTACTTAGAAAATTGAAAGATAGATTGGGAGGGGAA AGAAGAGATAGATTATGGGGGATTTAG
Upstream 100 bases:
>100_bases GGTTTCTTTTGAAGATTTAATTAAATTGAAGGAAGTTATAAAAAATCATAATTTTAGGAATTTAGGGTTACCACCTGTTA CTTGATTTTTATAAACATAA
Downstream 100 bases:
>100_bases TAGCCTAAAGGCTGTTTTTTGGGTTTACCAATTGATCTTGGGTATTGATGGGGACATTTATTAATAGAACTAATCCTAAT AATATTTCTAATACCGCGAT
Product: aldo/keto reductase
Products: NA
Alternate protein names: Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family; Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase; Aldo/Keto Reductase Family
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPINKDSKNNSIPRRRFGRTEIQIPVLSLGGMRFQQSWKDLDPKEINNQQQDILQKIINHAAKNGMHHIETARHYGTSER QIGWAFDQIDDPKRILQTKVPPNNDPSIFEQELELSMSRLNSKKIDLLAIHGINLPEHLDMTIRPNGCLQIVRRWQKDGL IGHVGFSTHANVDLIIKTIETGLFDYVNLHWYFIRQENERALQAADANDMGVFIISPTDKGGHLHTPSLKLLDLCSPLHP IEFNDLFCLRDQRVHTLSVGASIPEDLDIHLSAISKIDTMHGVINTIEKRLINASYKSLGESWLTTWNIGLPRWDQTPGE INIPTLLWLNNLLEAWDMESFVKDRYGLLGRGGHWFPGANADCLDCEVSEDDLKKVLINSPWSSEIPSVLRKLKDRLGGE RRDRLWGI
Sequences:
>Translated_408_residues MPINKDSKNNSIPRRRFGRTEIQIPVLSLGGMRFQQSWKDLDPKEINNQQQDILQKIINHAAKNGMHHIETARHYGTSER QIGWAFDQIDDPKRILQTKVPPNNDPSIFEQELELSMSRLNSKKIDLLAIHGINLPEHLDMTIRPNGCLQIVRRWQKDGL IGHVGFSTHANVDLIIKTIETGLFDYVNLHWYFIRQENERALQAADANDMGVFIISPTDKGGHLHTPSLKLLDLCSPLHP IEFNDLFCLRDQRVHTLSVGASIPEDLDIHLSAISKIDTMHGVINTIEKRLINASYKSLGESWLTTWNIGLPRWDQTPGE INIPTLLWLNNLLEAWDMESFVKDRYGLLGRGGHWFPGANADCLDCEVSEDDLKKVLINSPWSSEIPSVLRKLKDRLGGE RRDRLWGI >Mature_407_residues PINKDSKNNSIPRRRFGRTEIQIPVLSLGGMRFQQSWKDLDPKEINNQQQDILQKIINHAAKNGMHHIETARHYGTSERQ IGWAFDQIDDPKRILQTKVPPNNDPSIFEQELELSMSRLNSKKIDLLAIHGINLPEHLDMTIRPNGCLQIVRRWQKDGLI GHVGFSTHANVDLIIKTIETGLFDYVNLHWYFIRQENERALQAADANDMGVFIISPTDKGGHLHTPSLKLLDLCSPLHPI EFNDLFCLRDQRVHTLSVGASIPEDLDIHLSAISKIDTMHGVINTIEKRLINASYKSLGESWLTTWNIGLPRWDQTPGEI NIPTLLWLNNLLEAWDMESFVKDRYGLLGRGGHWFPGANADCLDCEVSEDDLKKVLINSPWSSEIPSVLRKLKDRLGGER RDRLWGI
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46635; Mature: 46504
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINKDSKNNSIPRRRFGRTEIQIPVLSLGGMRFQQSWKDLDPKEINNQQQDILQKIINH CCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHH AAKNGMHHIETARHYGTSERQIGWAFDQIDDPKRILQTKVPPNNDPSIFEQELELSMSRL HHHCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC NSKKIDLLAIHGINLPEHLDMTIRPNGCLQIVRRWQKDGLIGHVGFSTHANVDLIIKTIE CCCCEEEEEEECCCCCHHCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH TGLFDYVNLHWYFIRQENERALQAADANDMGVFIISPTDKGGHLHTPSLKLLDLCSPLHP HHHHHEEEEEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCEEECCCHHHHHHCCCCCC IEFNDLFCLRDQRVHTLSVGASIPEDLDIHLSAISKIDTMHGVINTIEKRLINASYKSLG CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESWLTTWNIGLPRWDQTPGEINIPTLLWLNNLLEAWDMESFVKDRYGLLGRGGHWFPGAN HHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCC ADCLDCEVSEDDLKKVLINSPWSSEIPSVLRKLKDRLGGERRDRLWGI CCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure PINKDSKNNSIPRRRFGRTEIQIPVLSLGGMRFQQSWKDLDPKEINNQQQDILQKIINH CCCCCCCCCCCCHHHCCCCEEEEEEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHH AAKNGMHHIETARHYGTSERQIGWAFDQIDDPKRILQTKVPPNNDPSIFEQELELSMSRL HHHCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC NSKKIDLLAIHGINLPEHLDMTIRPNGCLQIVRRWQKDGLIGHVGFSTHANVDLIIKTIE CCCCEEEEEEECCCCCHHCCEEECCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH TGLFDYVNLHWYFIRQENERALQAADANDMGVFIISPTDKGGHLHTPSLKLLDLCSPLHP HHHHHEEEEEEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCEEECCCHHHHHHCCCCCC IEFNDLFCLRDQRVHTLSVGASIPEDLDIHLSAISKIDTMHGVINTIEKRLINASYKSLG CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESWLTTWNIGLPRWDQTPGEINIPTLLWLNNLLEAWDMESFVKDRYGLLGRGGHWFPGAN HHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCC ADCLDCEVSEDDLKKVLINSPWSSEIPSVLRKLKDRLGGERRDRLWGI CCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA