| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026574
Identifier: 124026574
GI number: 124026574
Start: 1529024
End: 1529752
Strand: Direct
Name: 124026574
Synonym: NATL1_18691
Alternate gene names: NA
Gene position: 1529024-1529752 (Clockwise)
Preceding gene: 124026573
Following gene: 124026575
Centisome position: 82.0
GC content: 32.65
Gene sequence:
>729_bases ATGAAAGAAATAATCGCTATGCATGGATGGGCTGGTAATAGCAATCAATGGTCAAATTGGGAACAAATATTTAAGTGTTA TGAATGGGAATGGCGAAATTCTGAACGCGGATACACAGCTATAAGTCCACACATACCAAAATGGAATCACAACTCAAATC AAGTCAAACTAAAAAGAGTTGCTATATGTCACTCTCTTGGATCACATTTAATAGATAAACAAGTTTTATACTCAGCTACA CACGTTGTATTAATCAATAGTTTTAGTCGTTTTATTCCTAGTGGTAAAGAGAATCGCCCTATAAAACTGGCCCTAAATAG GATGATGGATGCAATTAATACACCCAATGAAGCATCTATGTTAAGAAAATTTCATGTAAAAGCTTATAAACCGAATCACA TAGATGCTGATTCAATCGAATCCAATCTCATAAATATCTCAGATCTAGGAAGGGTGAAATTAAAAAAAGATTTAAAACTT CTGATTGATTCTGATTCTCTACCAATTGGATTAAATACTCTTGCCAACGTACTTATTGTTAACAGTGAAGAAGACAATAT ATTGGCTAACCAAACGAAAGCAAAGCTAGCTGAAGATTTAAGAAAGCACTTAAAATTCTTACCGAAAATAATCAACCTTC AAGACGAGGGGCATTCCATTACAAAAATTAAAAATATCAAAAAAATAAAACACTGGCTAGAATTTAATCATGCAAAAAAT ATGGTCTAG
Upstream 100 bases:
>100_bases CACCAACTGTCCCCGAAGGTAAATCGAGACTCAGATTAGTGATCAGGCGAAATACACCAGATCAGGCCTTCGAAAGACTT ATCGAAATTCTTAAAAACAA
Downstream 100 bases:
>100_bases CCAAGTTAAAAAGAACTTTAATGAAGCTGCATTAAGTTATGACGAATCAGCATCAATTCAAAAAAGTACTGCTTTAAAAC TTGCAAAAATATGTTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKEIIAMHGWAGNSNQWSNWEQIFKCYEWEWRNSERGYTAISPHIPKWNHNSNQVKLKRVAICHSLGSHLIDKQVLYSAT HVVLINSFSRFIPSGKENRPIKLALNRMMDAINTPNEASMLRKFHVKAYKPNHIDADSIESNLINISDLGRVKLKKDLKL LIDSDSLPIGLNTLANVLIVNSEEDNILANQTKAKLAEDLRKHLKFLPKIINLQDEGHSITKIKNIKKIKHWLEFNHAKN MV
Sequences:
>Translated_242_residues MKEIIAMHGWAGNSNQWSNWEQIFKCYEWEWRNSERGYTAISPHIPKWNHNSNQVKLKRVAICHSLGSHLIDKQVLYSAT HVVLINSFSRFIPSGKENRPIKLALNRMMDAINTPNEASMLRKFHVKAYKPNHIDADSIESNLINISDLGRVKLKKDLKL LIDSDSLPIGLNTLANVLIVNSEEDNILANQTKAKLAEDLRKHLKFLPKIINLQDEGHSITKIKNIKKIKHWLEFNHAKN MV >Mature_242_residues MKEIIAMHGWAGNSNQWSNWEQIFKCYEWEWRNSERGYTAISPHIPKWNHNSNQVKLKRVAICHSLGSHLIDKQVLYSAT HVVLINSFSRFIPSGKENRPIKLALNRMMDAINTPNEASMLRKFHVKAYKPNHIDADSIESNLINISDLGRVKLKKDLKL LIDSDSLPIGLNTLANVLIVNSEEDNILANQTKAKLAEDLRKHLKFLPKIINLQDEGHSITKIKNIKKIKHWLEFNHAKN MV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27897; Mature: 27897
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIAMHGWAGNSNQWSNWEQIFKCYEWEWRNSERGYTAISPHIPKWNHNSNQVKLKRV CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHH AICHSLGSHLIDKQVLYSATHVVLINSFSRFIPSGKENRPIKLALNRMMDAINTPNEASM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHH LRKFHVKAYKPNHIDADSIESNLINISDLGRVKLKKDLKLLIDSDSLPIGLNTLANVLIV HHHHHHHEECCCCCCHHHHHHCCCCHHHCCHHHHHCCEEEEECCCCCCCCHHHHCEEEEE NSEEDNILANQTKAKLAEDLRKHLKFLPKIINLQDEGHSITKIKNIKKIKHWLEFNHAKN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC MV CC >Mature Secondary Structure MKEIIAMHGWAGNSNQWSNWEQIFKCYEWEWRNSERGYTAISPHIPKWNHNSNQVKLKRV CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEHHHH AICHSLGSHLIDKQVLYSATHVVLINSFSRFIPSGKENRPIKLALNRMMDAINTPNEASM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHH LRKFHVKAYKPNHIDADSIESNLINISDLGRVKLKKDLKLLIDSDSLPIGLNTLANVLIV HHHHHHHEECCCCCCHHHHHHCCCCHHHCCHHHHHCCEEEEECCCCCCCCHHHHCEEEEE NSEEDNILANQTKAKLAEDLRKHLKFLPKIINLQDEGHSITKIKNIKKIKHWLEFNHAKN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC MV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA