Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026534

Identifier: 124026534

GI number: 124026534

Start: 1492160

End: 1492423

Strand: Reverse

Name: 124026534

Synonym: NATL1_18291

Alternate gene names: NA

Gene position: 1492423-1492160 (Counterclockwise)

Preceding gene: 124026535

Following gene: 124026532

Centisome position: 80.03

GC content: 33.71

Gene sequence:

>264_bases
ATGAAAAATATTGATTTTACGGAAGATAAAAGCTTGATTCAAAGTTCGGATGTTTTGGAATCTGAGGATACAATTAGTTT
TCAAACAGAAATACCAAAGCAAATTCAACAAGCGATGAAGGTTTACATTGATAAACACCCCAATTGGGATCAATATAGGC
TTTTACAAGCTGCGCTTGCAGGGTTTCTAATTCAAAATGGCATCAGTTCCAGATTGATAACACGTCTTTATATTGGCAAT
ATGTTTGGATCTCATTCTTTTTGA

Upstream 100 bases:

>100_bases
GTACTTGATCTGAGAATGAGACTGCCCGAGAAAGTGCTTTTTACAGATCTGGTTTTGAGAGTAGTTTGCTGATGGATTAA
ATTTTCTAAGAGCTTTTTAA

Downstream 100 bases:

>100_bases
ATTAATTTTTCTTGAGCTTTATGAGAAGCTCCAAAGCGATATCTTTATTAATTGGCATAATTGATAGCCTATTTCCTTTA
CGAACTAGAGTGAGTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKNIDFTEDKSLIQSSDVLESEDTISFQTEIPKQIQQAMKVYIDKHPNWDQYRLLQAALAGFLIQNGISSRLITRLYIGN
MFGSHSF

Sequences:

>Translated_87_residues
MKNIDFTEDKSLIQSSDVLESEDTISFQTEIPKQIQQAMKVYIDKHPNWDQYRLLQAALAGFLIQNGISSRLITRLYIGN
MFGSHSF
>Mature_87_residues
MKNIDFTEDKSLIQSSDVLESEDTISFQTEIPKQIQQAMKVYIDKHPNWDQYRLLQAALAGFLIQNGISSRLITRLYIGN
MFGSHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10026; Mature: 10026

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIDFTEDKSLIQSSDVLESEDTISFQTEIPKQIQQAMKVYIDKHPNWDQYRLLQAALA
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GFLIQNGISSRLITRLYIGNMFGSHSF
HHHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNIDFTEDKSLIQSSDVLESEDTISFQTEIPKQIQQAMKVYIDKHPNWDQYRLLQAALA
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GFLIQNGISSRLITRLYIGNMFGSHSF
HHHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA