| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026531
Identifier: 124026531
GI number: 124026531
Start: 1490426
End: 1490746
Strand: Reverse
Name: 124026531
Synonym: NATL1_18261
Alternate gene names: NA
Gene position: 1490746-1490426 (Counterclockwise)
Preceding gene: 124026532
Following gene: 124026529
Centisome position: 79.94
GC content: 38.01
Gene sequence:
>321_bases ATGGCTAGGGCTTATTTCGTAGCAGCCAAGAATGATGGTGAAAAAAGGTTTCTGGAAACTTGTGAGAATAACTCAATAGT CAGCAAGTTTTATCCTCTTGGTGATCTCGACTTGAACTATCATCGAAACGTTCCAGATAGAGTTGCAGAACTTTCTTATT ACGCAAATGCCATTGCAGACAAGATGTATGGACAGAATGAGTGGTGCGAGTTCAGAGATAAAATGAAATCTATAGCATTG GCATTCGATCCAGATCTTATGGATTTTGGTAAATATGAAAGCTTAATGCAAATGAAGAGGGATGATTATCCCATTGAATA G
Upstream 100 bases:
>100_bases ACATGACGACTCGCTCTTCTCGCCTGTATACATGACTGACCGCTCTCTTTATGTCACTGACTTCGGAATGATTAGTATTT GATTAGTTAGTTTATTAGTA
Downstream 100 bases:
>100_bases CAGCTCTCTTCTTCCTGTATATATAACTGACCGCAAACTTCCACGATAAATCGCTTCTAAGGGGTCTGTAAGATTAGATA ACTATATCTACCTAAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MARAYFVAAKNDGEKRFLETCENNSIVSKFYPLGDLDLNYHRNVPDRVAELSYYANAIADKMYGQNEWCEFRDKMKSIAL AFDPDLMDFGKYESLMQMKRDDYPIE
Sequences:
>Translated_106_residues MARAYFVAAKNDGEKRFLETCENNSIVSKFYPLGDLDLNYHRNVPDRVAELSYYANAIADKMYGQNEWCEFRDKMKSIAL AFDPDLMDFGKYESLMQMKRDDYPIE >Mature_105_residues ARAYFVAAKNDGEKRFLETCENNSIVSKFYPLGDLDLNYHRNVPDRVAELSYYANAIADKMYGQNEWCEFRDKMKSIALA FDPDLMDFGKYESLMQMKRDDYPIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12458; Mature: 12327
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAYFVAAKNDGEKRFLETCENNSIVSKFYPLGDLDLNYHRNVPDRVAELSYYANAIAD CCCEEEEEECCCCHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH KMYGQNEWCEFRDKMKSIALAFDPDLMDFGKYESLMQMKRDDYPIE HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARAYFVAAKNDGEKRFLETCENNSIVSKFYPLGDLDLNYHRNVPDRVAELSYYANAIAD CCEEEEEECCCCHHHHHHHHCCCCEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH KMYGQNEWCEFRDKMKSIALAFDPDLMDFGKYESLMQMKRDDYPIE HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA