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The map label for this gene is yfmR [H]

Identifier: 124026519

GI number: 124026519

Start: 1478820

End: 1480745

Strand: Reverse

Name: yfmR [H]

Synonym: NATL1_18141

Alternate gene names: 124026519

Gene position: 1480745-1478820 (Counterclockwise)

Preceding gene: 124026520

Following gene: 124026518

Centisome position: 79.41

GC content: 35.98

Gene sequence:

>1926_bases
GTGTTGATTAGTCTTGTTAATGCTTCAACAGACTTTGGGATAAAAAATCTTTTTAAAAATTTAGATCTTCATGTAAATAA
AAAAGAGAGACTTGGTTTGATTGGTCCAAATGGATCTGGCAAGTCAACACTTTTGAGAGTCATTGCAGGAATTGAACCTT
TGATGGAAGGAGAAAGGAGATGTTTATCATCTTTGCGGATATCTTTAGTTGGGCAAGAAACAAGTTACAACAGTGAAAAA
AGTATTTTGGAAGAAGTCCTTGAAGGGTGTGGAGAAAAAAGAAAATTATTACTTAATTTCAGTCAGCTAAGTAGAAAAAT
CGCTCAAAATCCAGAAGATGAAGACCTTTTGAAAAAACTTGGTCAGGCGAGTGAACTTATGGATGCCGCTGGGGCATGGA
ATTTAGAACAACAATGCCAAGATGTTTTAAGAAGATTAGGTATAAAAGACTTAGATAAGCCAGTAAAAGAGCTTTCTGGT
GGTTATCGCAAAAGAGTGGGACTTGCCGCTGCGCTTGTCTCTAAACCAGACGTCTTACTTCTTGATGAACCTACTAACCA
CCTAGATGCATCTGCAGTGGAATGGCTTCAAAATTGGTTAGACCATTATGAGGGTGCGCTGGTCTTGATAACTCACGATA
GATATGTTCTTGATCGCATTACCAATCGGATGGTCGAAATTAACAATGGAGAAACTCGCAAGTATTCGGGCAATTATCGT
GAATTTCTTCAACAAAAAGTTGAACAAGAGCAATCAGAGGCATCTACACAGAAAAAGTTTCAGGGTGTTTTAAGAAAGGA
ATTAGCTTGGTTAAGACAGGGCCCCAAAGCAAGAAGTACAAAACAAAAAGCACGTATTCAACGGATTGCTGAAATGCAAG
CGAAACCTAAAAGTCATGTCAAAGCTAATTTAGAAATGAATTCATTGAGTAGAAGAATTGGAAAAATCGCAATTGAGGCT
GAAGGTGTAGGGCTATCTCTCAACAATAAAGAGAATAATTTGGATCTTTTATGTGATTTTACTTATAGCTTTAGTCCAGA
GGACCGAGTAGGAATTATTGGTCCAAATGGGAGTGGTAAATCCACTCTTTTAGATCTAATTTCGGGTAAAAGATTGCCTA
CAAGTGGGAAAATAAAACTTGGAGAAACGGTTCATATTGGCTACTTAGATCAACATACAAATGACTTAAATCAAGGGAGT
GGCTTAAACCGCAAAGTTATCGATTTTGTGGAGGAGGCTGCATTACGAATTGATCATGGAGGGAAACAAATTACAGCATC
ACAACTCTTAGAAAAATTCCTCTTTCCACCCAGTCAACAACATAGTCCTCTGCTAAAACTTTCAGGGGGAGAAAAAAGAA
GACTTGCTCTATGCAAAATGCTCATACAAGCTCCCAACGTATTATTGCTTGATGAGCCTACAAATGATTTAGATATACAA
ACACTAAGTGTGCTAGAAGATTTTCTTGATGATTTTAAAGGTTGTGTCGTAGTCGTATCGCATGATAGATATTTTCTTGA
TCGCACTATTGATCGAATTTTTAATTTTGAAAACGGTCACTTGCGAAGGTATGAAGGAAATTACTCTCGATTTCTTGATC
ATAAAATATTAGAGGAGCGAAACAATGAAACCAAAAAACGAGCCAAAATAGTCAATAATTCACAAAATAAGCGTGGACAA
GAAATAAAATTAGATTCTAAAAATGATTCGAGACGATTGAGTTTTAAAGAAGCTAGAGAATTAAAAGAATTAGATGTGAG
ACTACCTATGTTAGAAAAAAAGAAAATATGTTTAGAAAAAAAGATTACTGATAGTGATGTAGACATTAGTGAAATTAGTC
ATCAATTAGCAGAACTAATTGAATCTATTCAAGAGCATGAGGATAGATGGATTGAGCTAAGTGAGTTGTCTGAGTCAGCA
AAGTAA

Upstream 100 bases:

>100_bases
TCTATTTATAAATTTCATGTTCAAACGTTGGAAAAATTCTAGAGGATTAAGGGGTATTATTTAAAAGTTAGCTTTAGTTA
AGGACGTGAGGACTTAAGCT

Downstream 100 bases:

>100_bases
CCAAGTAATTTCTCTCTTGAGGTAGATAAACAGATAGAGACCAAATCTCCACCGTTGACATTTTTGAGTATAAATACTAT
AAATGGGTGTGGCTTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MLISLVNASTDFGIKNLFKNLDLHVNKKERLGLIGPNGSGKSTLLRVIAGIEPLMEGERRCLSSLRISLVGQETSYNSEK
SILEEVLEGCGEKRKLLLNFSQLSRKIAQNPEDEDLLKKLGQASELMDAAGAWNLEQQCQDVLRRLGIKDLDKPVKELSG
GYRKRVGLAAALVSKPDVLLLDEPTNHLDASAVEWLQNWLDHYEGALVLITHDRYVLDRITNRMVEINNGETRKYSGNYR
EFLQQKVEQEQSEASTQKKFQGVLRKELAWLRQGPKARSTKQKARIQRIAEMQAKPKSHVKANLEMNSLSRRIGKIAIEA
EGVGLSLNNKENNLDLLCDFTYSFSPEDRVGIIGPNGSGKSTLLDLISGKRLPTSGKIKLGETVHIGYLDQHTNDLNQGS
GLNRKVIDFVEEAALRIDHGGKQITASQLLEKFLFPPSQQHSPLLKLSGGEKRRLALCKMLIQAPNVLLLDEPTNDLDIQ
TLSVLEDFLDDFKGCVVVVSHDRYFLDRTIDRIFNFENGHLRRYEGNYSRFLDHKILEERNNETKKRAKIVNNSQNKRGQ
EIKLDSKNDSRRLSFKEARELKELDVRLPMLEKKKICLEKKITDSDVDISEISHQLAELIESIQEHEDRWIELSELSESA
K

Sequences:

>Translated_641_residues
MLISLVNASTDFGIKNLFKNLDLHVNKKERLGLIGPNGSGKSTLLRVIAGIEPLMEGERRCLSSLRISLVGQETSYNSEK
SILEEVLEGCGEKRKLLLNFSQLSRKIAQNPEDEDLLKKLGQASELMDAAGAWNLEQQCQDVLRRLGIKDLDKPVKELSG
GYRKRVGLAAALVSKPDVLLLDEPTNHLDASAVEWLQNWLDHYEGALVLITHDRYVLDRITNRMVEINNGETRKYSGNYR
EFLQQKVEQEQSEASTQKKFQGVLRKELAWLRQGPKARSTKQKARIQRIAEMQAKPKSHVKANLEMNSLSRRIGKIAIEA
EGVGLSLNNKENNLDLLCDFTYSFSPEDRVGIIGPNGSGKSTLLDLISGKRLPTSGKIKLGETVHIGYLDQHTNDLNQGS
GLNRKVIDFVEEAALRIDHGGKQITASQLLEKFLFPPSQQHSPLLKLSGGEKRRLALCKMLIQAPNVLLLDEPTNDLDIQ
TLSVLEDFLDDFKGCVVVVSHDRYFLDRTIDRIFNFENGHLRRYEGNYSRFLDHKILEERNNETKKRAKIVNNSQNKRGQ
EIKLDSKNDSRRLSFKEARELKELDVRLPMLEKKKICLEKKITDSDVDISEISHQLAELIESIQEHEDRWIELSELSESA
K
>Mature_641_residues
MLISLVNASTDFGIKNLFKNLDLHVNKKERLGLIGPNGSGKSTLLRVIAGIEPLMEGERRCLSSLRISLVGQETSYNSEK
SILEEVLEGCGEKRKLLLNFSQLSRKIAQNPEDEDLLKKLGQASELMDAAGAWNLEQQCQDVLRRLGIKDLDKPVKELSG
GYRKRVGLAAALVSKPDVLLLDEPTNHLDASAVEWLQNWLDHYEGALVLITHDRYVLDRITNRMVEINNGETRKYSGNYR
EFLQQKVEQEQSEASTQKKFQGVLRKELAWLRQGPKARSTKQKARIQRIAEMQAKPKSHVKANLEMNSLSRRIGKIAIEA
EGVGLSLNNKENNLDLLCDFTYSFSPEDRVGIIGPNGSGKSTLLDLISGKRLPTSGKIKLGETVHIGYLDQHTNDLNQGS
GLNRKVIDFVEEAALRIDHGGKQITASQLLEKFLFPPSQQHSPLLKLSGGEKRRLALCKMLIQAPNVLLLDEPTNDLDIQ
TLSVLEDFLDDFKGCVVVVSHDRYFLDRTIDRIFNFENGHLRRYEGNYSRFLDHKILEERNNETKKRAKIVNNSQNKRGQ
EIKLDSKNDSRRLSFKEARELKELDVRLPMLEKKKICLEKKITDSDVDISEISHQLAELIESIQEHEDRWIELSELSESA
K

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=541, Percent_Identity=27.7264325323475, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI10947137, Length=564, Percent_Identity=28.5460992907801, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI27881506, Length=562, Percent_Identity=28.6476868327402, Blast_Score=196, Evalue=7e-50,
Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=29.5412844036697, Blast_Score=186, Evalue=8e-47,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=29.5412844036697, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI73747915, Length=241, Percent_Identity=24.4813278008299, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=527, Percent_Identity=37.9506641366224, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1787182, Length=647, Percent_Identity=33.8485316846986, Blast_Score=329, Evalue=4e-91,
Organism=Escherichia coli, GI1789751, Length=651, Percent_Identity=30.1075268817204, Blast_Score=254, Evalue=8e-69,
Organism=Escherichia coli, GI1787041, Length=562, Percent_Identity=31.4946619217082, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1788506, Length=560, Percent_Identity=23.5714285714286, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788165, Length=217, Percent_Identity=29.4930875576037, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=27.3504273504274, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787089, Length=215, Percent_Identity=29.3023255813954, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786398, Length=252, Percent_Identity=30.1587301587302, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=28, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=30.316742081448, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994997, Length=221, Percent_Identity=27.6018099547511, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=196, Percent_Identity=29.5918367346939, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790544, Length=231, Percent_Identity=27.7056277056277, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI87081834, Length=206, Percent_Identity=28.1553398058252, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=186, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=26.9406392694064, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=189, Percent_Identity=29.6296296296296, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=29.2792792792793, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=30.1818181818182, Blast_Score=212, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17555318, Length=542, Percent_Identity=28.2287822878229, Blast_Score=203, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17553372, Length=548, Percent_Identity=28.6496350364964, Blast_Score=180, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=30.3142329020333, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=27.8776978417266, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6324314, Length=389, Percent_Identity=27.7634961439589, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=28.6802030456853, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6325030, Length=397, Percent_Identity=28.9672544080605, Blast_Score=130, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24666836, Length=561, Percent_Identity=30.4812834224599, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24642252, Length=574, Percent_Identity=30.1393728222997, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18859989, Length=574, Percent_Identity=30.1393728222997, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24641342, Length=553, Percent_Identity=28.75226039783, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24659289, Length=239, Percent_Identity=25.1046025104602, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72714; Mature: 72714

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLVNASTDFGIKNLFKNLDLHVNKKERLGLIGPNGSGKSTLLRVIAGIEPLMEGERR
CEEEEECCCCCCCHHHHHHCCCCEECHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
CLSSLRISLVGQETSYNSEKSILEEVLEGCGEKRKLLLNFSQLSRKIAQNPEDEDLLKKL
HHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GQASELMDAAGAWNLEQQCQDVLRRLGIKDLDKPVKELSGGYRKRVGLAAALVSKPDVLL
CCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
LDEPTNHLDASAVEWLQNWLDHYEGALVLITHDRYVLDRITNRMVEINNGETRKYSGNYR
EECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHH
EFLQQKVEQEQSEASTQKKFQGVLRKELAWLRQGPKARSTKQKARIQRIAEMQAKPKSHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
KANLEMNSLSRRIGKIAIEAEGVGLSLNNKENNLDLLCDFTYSFSPEDRVGIIGPNGSGK
EECCHHHHHHHHHHCEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCH
STLLDLISGKRLPTSGKIKLGETVHIGYLDQHTNDLNQGSGLNRKVIDFVEEAALRIDHG
HHHHHHHCCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GKQITASQLLEKFLFPPSQQHSPLLKLSGGEKRRLALCKMLIQAPNVLLLDEPTNDLDIQ
CCEEHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH
TLSVLEDFLDDFKGCVVVVSHDRYFLDRTIDRIFNFENGHLRRYEGNYSRFLDHKILEER
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHC
NNETKKRAKIVNNSQNKRGQEIKLDSKNDSRRLSFKEARELKELDVRLPMLEKKKICLEK
CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KITDSDVDISEISHQLAELIESIQEHEDRWIELSELSESAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCC
>Mature Secondary Structure
MLISLVNASTDFGIKNLFKNLDLHVNKKERLGLIGPNGSGKSTLLRVIAGIEPLMEGERR
CEEEEECCCCCCCHHHHHHCCCCEECHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
CLSSLRISLVGQETSYNSEKSILEEVLEGCGEKRKLLLNFSQLSRKIAQNPEDEDLLKKL
HHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GQASELMDAAGAWNLEQQCQDVLRRLGIKDLDKPVKELSGGYRKRVGLAAALVSKPDVLL
CCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
LDEPTNHLDASAVEWLQNWLDHYEGALVLITHDRYVLDRITNRMVEINNGETRKYSGNYR
EECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHH
EFLQQKVEQEQSEASTQKKFQGVLRKELAWLRQGPKARSTKQKARIQRIAEMQAKPKSHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
KANLEMNSLSRRIGKIAIEAEGVGLSLNNKENNLDLLCDFTYSFSPEDRVGIIGPNGSGK
EECCHHHHHHHHHHCEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCH
STLLDLISGKRLPTSGKIKLGETVHIGYLDQHTNDLNQGSGLNRKVIDFVEEAALRIDHG
HHHHHHHCCCCCCCCCCEEECCEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GKQITASQLLEKFLFPPSQQHSPLLKLSGGEKRRLALCKMLIQAPNVLLLDEPTNDLDIQ
CCEEHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH
TLSVLEDFLDDFKGCVVVVSHDRYFLDRTIDRIFNFENGHLRRYEGNYSRFLDHKILEER
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHC
NNETKKRAKIVNNSQNKRGQEIKLDSKNDSRRLSFKEARELKELDVRLPMLEKKKICLEK
CCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KITDSDVDISEISHQLAELIESIQEHEDRWIELSELSESAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]