| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026498
Identifier: 124026498
GI number: 124026498
Start: 1470673
End: 1471074
Strand: Direct
Name: 124026498
Synonym: NATL1_17931
Alternate gene names: NA
Gene position: 1470673-1471074 (Clockwise)
Preceding gene: 124026494
Following gene: 124026501
Centisome position: 78.87
GC content: 26.87
Gene sequence:
>402_bases ATGAACTTTGAACAAACAAAAAATTTAATAGGAAGAATCCTAATTTCAGCTATATTTATTTATGCAATTCCAGGTAAAAT AATAAATTTCGAACAAACTGTTGAAGTTATATCAAATAAAAATATATCTCCTACGTTAGCTCCTCTTTTATTATTTTCAG CTATCACTTGTTTGATTTTTGGTTCAATACTTTTCATCTCAGGATTCAAGCAAAGATTCGGTGCATATCTTCTGCTTATA TTTATAGTTCCAACAACTTTTATTTTTCATTTTTATCCTTTTCAAATAAAAGCTGTATTAATGAATGCTGGGCTAATTGG AGGATTAATACTTGGGCTAAACAATGTAAAAGGTAATTCACTCAAAGAACTTTTTAATAACCAGACAAATAAAACTAATT AA
Upstream 100 bases:
>100_bases ACAAAAACAACATATATATTCCATAATAATAAAACCCGAACAAATCTAAACATTAAAAAATTTCCACGAGAAATTAATGT TTTATCCTAGTATTTATTAA
Downstream 100 bases:
>100_bases AATTTTAATTCATTTTTAAAAATATTTGTTTAGTGCCACTTCAACTTAATATCAATAGAGCATTCAAGATTAAGCTTCAC AGGACAATCATTAGCTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNFEQTKNLIGRILISAIFIYAIPGKIINFEQTVEVISNKNISPTLAPLLLFSAITCLIFGSILFISGFKQRFGAYLLLI FIVPTTFIFHFYPFQIKAVLMNAGLIGGLILGLNNVKGNSLKELFNNQTNKTN
Sequences:
>Translated_133_residues MNFEQTKNLIGRILISAIFIYAIPGKIINFEQTVEVISNKNISPTLAPLLLFSAITCLIFGSILFISGFKQRFGAYLLLI FIVPTTFIFHFYPFQIKAVLMNAGLIGGLILGLNNVKGNSLKELFNNQTNKTN >Mature_133_residues MNFEQTKNLIGRILISAIFIYAIPGKIINFEQTVEVISNKNISPTLAPLLLFSAITCLIFGSILFISGFKQRFGAYLLLI FIVPTTFIFHFYPFQIKAVLMNAGLIGGLILGLNNVKGNSLKELFNNQTNKTN
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14817; Mature: 14817
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEQTKNLIGRILISAIFIYAIPGKIINFEQTVEVISNKNISPTLAPLLLFSAITCLIF CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GSILFISGFKQRFGAYLLLIFIVPTTFIFHFYPFQIKAVLMNAGLIGGLILGLNNVKGNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LKELFNNQTNKTN HHHHHCCCCCCCC >Mature Secondary Structure MNFEQTKNLIGRILISAIFIYAIPGKIINFEQTVEVISNKNISPTLAPLLLFSAITCLIF CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GSILFISGFKQRFGAYLLLIFIVPTTFIFHFYPFQIKAVLMNAGLIGGLILGLNNVKGNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LKELFNNQTNKTN HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA