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The map label for this gene is petF1 [H]

Identifier: 124026485

GI number: 124026485

Start: 1460253

End: 1460552

Strand: Reverse

Name: petF1 [H]

Synonym: NATL1_17801

Alternate gene names: 124026485

Gene position: 1460552-1460253 (Counterclockwise)

Preceding gene: 124026486

Following gene: 124026484

Centisome position: 78.33

GC content: 34.0

Gene sequence:

>300_bases
ATGACATCTTTTAAGATCACTTTTATTAATGAATTAAGTGGTTTAAAAGAAATTATTGATATTCCAGATGACAAATACAT
CCTTGATGCCGCGTGTGAGCAAAATATTGAGCTTCCTGCCTCATGTAGAGAAGGAACTTGTTCGACTTGTGTTGCTAAAC
TAGAAAAAGGCAATGTTGATCAACAAGATCAAAGTTTTTTGGATGATGATCAAATAGAAAAAGGGTATATTTTGATTTGC
AAGGCTTATCCACTCTCTGATTGCATAATACGGACACATGCTGAGGATCAATTGTATTGA

Upstream 100 bases:

>100_bases
TTCTTGAAATAAAGAAAAAGGATCAATGGGCCTTAATGGTTTTGACTCTTAATTTGTCTTGATTAAATAAATTCTAAATT
TTCAGATTTTAAAAAACCTC

Downstream 100 bases:

>100_bases
TATTAATTTTTTCGCCAGATTGTCAGCGTTTTGCTTGCCAAAGATCTCCTTTCTCGCCAACCTCTTACTTATGTGCTCAT
GGGCGCAAATAAAACTATTT

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTSFKITFINELSGLKEIIDIPDDKYILDAACEQNIELPASCREGTCSTCVAKLEKGNVDQQDQSFLDDDQIEKGYILIC
KAYPLSDCIIRTHAEDQLY

Sequences:

>Translated_99_residues
MTSFKITFINELSGLKEIIDIPDDKYILDAACEQNIELPASCREGTCSTCVAKLEKGNVDQQDQSFLDDDQIEKGYILIC
KAYPLSDCIIRTHAEDQLY
>Mature_98_residues
TSFKITFINELSGLKEIIDIPDDKYILDAACEQNIELPASCREGTCSTCVAKLEKGNVDQQDQSFLDDDQIEKGYILICK
AYPLSDCIIRTHAEDQLY

Specific function: Principal electron carrier in NADP-photoreduction [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=75, Percent_Identity=38.6666666666667, Blast_Score=65, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 11168; Mature: 11037

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFKITFINELSGLKEIIDIPDDKYILDAACEQNIELPASCREGTCSTCVAKLEKGNVD
CCCEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
QQDQSFLDDDQIEKGYILICKAYPLSDCIIRTHAEDQLY
CCHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
TSFKITFINELSGLKEIIDIPDDKYILDAACEQNIELPASCREGTCSTCVAKLEKGNVD
CCEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
QQDQSFLDDDQIEKGYILICKAYPLSDCIIRTHAEDQLY
CCHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA