Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124026401

Identifier: 124026401

GI number: 124026401

Start: 1381818

End: 1382783

Strand: Direct

Name: 124026401

Synonym: NATL1_16961

Alternate gene names: NA

Gene position: 1381818-1382783 (Clockwise)

Preceding gene: 124026400

Following gene: 124026402

Centisome position: 74.1

GC content: 38.61

Gene sequence:

>966_bases
GTGTTCAAAACTACTCGCTTTAGTTGGATTAAAAGAAAACAGATTTTTTCTTTTCTGGTTGTTTCAACAATAATCTTCTC
TTCTTTATTTACCAATCCCAACACTGCAACAGCAGCTAGTGGGGGGCGAATAGGTGGAGGCAGTTTTCAGGCGCCTTCTT
CACCACGAAGACAAAATTACGGAGGCTATGGAGGCAATAACTTTCGAGGTTATGGAAGTGGATATAGAGGGGGTGGTATT
GGTTTTCCTTTTTTAATGCCAATATTTGGCTTTGGCGGAGGCGGGATCTTTGGGTTTTTAATACTTATGTCAATCGTTGG
TGTGATTGTTAATTCATTTAAAAGCTCTTCAAATTTTTCCAGCGCAAGCAATAACTCAATTGTTTCTCAATCAACGAACC
CATCCAAAGTTTCTTTAATTCAGTTTCAAATTGGCTTACTGGCAAGTGCAAAAGAAATTCAAGTGGACCTAAGGGACCTT
GCTGCCTCTTCAAACACCTCAACGTCATCTGGCCTTCAAAGAGTTCTTCAAGACACAACACTGTCCTTACTTAGGAAGCC
TGAATTATGGGTCTATTCAAATATAGAAACAGGTTCTGTTCCATATGCCTCAGCAGAATCAACATTTAATCGGATATCAA
TAACTGAAAGAAGCAAACTAAAGGCAGAGCTCACATCAAACTATTCTGGTCAAATATCTAGCTCAACAGATAAGCAATCC
AATCCTGGGGATTCGGATTCAACAAATGAATACATCGCAATAACGATTCTCGTAGCAACAAAAAAAGATTTAAGTCTTCA
AAACTCCGCAAACACCGAAGTCATCACAGAAGCTTTGAGAATCTTAGGGTCAATATCATCTAATGACTTAATTGCCTTAG
AAGTTATCTGGCAACCTGACGGAGAAGGAGAGACCCTGAGAGAAGAAGAACTAATAATTCAATACCCAAATCTTAAACAT
TTATAA

Upstream 100 bases:

>100_bases
AGAAGTTTGGACAAATACAAAAATCAAACATGGCGATTGCTTAGAGGTTGTGACAATTGTTGGTGGAGGTTCCTACAGTT
AGTTAATCCTGAATAGATAA

Downstream 100 bases:

>100_bases
AGTCAGTGTCCAAAATAACCAAAAAACGGATTTCTTTATATTTTTTTCATCTTATTTACGTAAACAACAGTCAATTTTTA
CGTAAATAGCAGTTAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI
GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL
AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS
NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH
L

Sequences:

>Translated_321_residues
MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI
GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL
AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS
NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH
L
>Mature_321_residues
MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI
GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL
AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS
NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH
L

Specific function: Unknown

COG id: COG4371

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34614; Mature: 34614

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGYGGNNFRGYGSGYRGGGIGFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDLAASSNTSTSSGLQRVLQDTT
CCCCCCEEECCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS
HHHHCCCCEEEEECCCCCCCCCCCHHCCHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCC
NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPD
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC
GEGETLREEELIIQYPNLKHL
CCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGYGGNNFRGYGSGYRGGGIGFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDLAASSNTSTSSGLQRVLQDTT
CCCCCCEEECCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS
HHHHCCCCEEEEECCCCCCCCCCCHHCCHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCC
NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPD
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC
GEGETLREEELIIQYPNLKHL
CCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA