| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026401
Identifier: 124026401
GI number: 124026401
Start: 1381818
End: 1382783
Strand: Direct
Name: 124026401
Synonym: NATL1_16961
Alternate gene names: NA
Gene position: 1381818-1382783 (Clockwise)
Preceding gene: 124026400
Following gene: 124026402
Centisome position: 74.1
GC content: 38.61
Gene sequence:
>966_bases GTGTTCAAAACTACTCGCTTTAGTTGGATTAAAAGAAAACAGATTTTTTCTTTTCTGGTTGTTTCAACAATAATCTTCTC TTCTTTATTTACCAATCCCAACACTGCAACAGCAGCTAGTGGGGGGCGAATAGGTGGAGGCAGTTTTCAGGCGCCTTCTT CACCACGAAGACAAAATTACGGAGGCTATGGAGGCAATAACTTTCGAGGTTATGGAAGTGGATATAGAGGGGGTGGTATT GGTTTTCCTTTTTTAATGCCAATATTTGGCTTTGGCGGAGGCGGGATCTTTGGGTTTTTAATACTTATGTCAATCGTTGG TGTGATTGTTAATTCATTTAAAAGCTCTTCAAATTTTTCCAGCGCAAGCAATAACTCAATTGTTTCTCAATCAACGAACC CATCCAAAGTTTCTTTAATTCAGTTTCAAATTGGCTTACTGGCAAGTGCAAAAGAAATTCAAGTGGACCTAAGGGACCTT GCTGCCTCTTCAAACACCTCAACGTCATCTGGCCTTCAAAGAGTTCTTCAAGACACAACACTGTCCTTACTTAGGAAGCC TGAATTATGGGTCTATTCAAATATAGAAACAGGTTCTGTTCCATATGCCTCAGCAGAATCAACATTTAATCGGATATCAA TAACTGAAAGAAGCAAACTAAAGGCAGAGCTCACATCAAACTATTCTGGTCAAATATCTAGCTCAACAGATAAGCAATCC AATCCTGGGGATTCGGATTCAACAAATGAATACATCGCAATAACGATTCTCGTAGCAACAAAAAAAGATTTAAGTCTTCA AAACTCCGCAAACACCGAAGTCATCACAGAAGCTTTGAGAATCTTAGGGTCAATATCATCTAATGACTTAATTGCCTTAG AAGTTATCTGGCAACCTGACGGAGAAGGAGAGACCCTGAGAGAAGAAGAACTAATAATTCAATACCCAAATCTTAAACAT TTATAA
Upstream 100 bases:
>100_bases AGAAGTTTGGACAAATACAAAAATCAAACATGGCGATTGCTTAGAGGTTGTGACAATTGTTGGTGGAGGTTCCTACAGTT AGTTAATCCTGAATAGATAA
Downstream 100 bases:
>100_bases AGTCAGTGTCCAAAATAACCAAAAAACGGATTTCTTTATATTTTTTTCATCTTATTTACGTAAACAACAGTCAATTTTTA CGTAAATAGCAGTTAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH L
Sequences:
>Translated_321_residues MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH L >Mature_321_residues MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNYGGYGGNNFRGYGSGYRGGGI GFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFSSASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDL AASSNTSTSSGLQRVLQDTTLSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPDGEGETLREEELIIQYPNLKH L
Specific function: Unknown
COG id: COG4371
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34614; Mature: 34614
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGYGGNNFRGYGSGYRGGGIGFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDLAASSNTSTSSGLQRVLQDTT CCCCCCEEECCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS HHHHCCCCEEEEECCCCCCCCCCCHHCCHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCC NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPD CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC GEGETLREEELIIQYPNLKHL CCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MFKTTRFSWIKRKQIFSFLVVSTIIFSSLFTNPNTATAASGGRIGGGSFQAPSSPRRQNY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGYGGNNFRGYGSGYRGGGIGFPFLMPIFGFGGGGIFGFLILMSIVGVIVNSFKSSSNFS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SASNNSIVSQSTNPSKVSLIQFQIGLLASAKEIQVDLRDLAASSNTSTSSGLQRVLQDTT CCCCCCEEECCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LSLLRKPELWVYSNIETGSVPYASAESTFNRISITERSKLKAELTSNYSGQISSSTDKQS HHHHCCCCEEEEECCCCCCCCCCCHHCCHHEEEECHHHHHHHHHHCCCCCCCCCCCCCCC NPGDSDSTNEYIAITILVATKKDLSLQNSANTEVITEALRILGSISSNDLIALEVIWQPD CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC GEGETLREEELIIQYPNLKHL CCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA