| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yaeL [C]
Identifier: 124026369
GI number: 124026369
Start: 1355013
End: 1356098
Strand: Direct
Name: yaeL [C]
Synonym: NATL1_16631
Alternate gene names: 124026369
Gene position: 1355013-1356098 (Clockwise)
Preceding gene: 124026368
Following gene: 124026370
Centisome position: 72.67
GC content: 36.28
Gene sequence:
>1086_bases ATGAACGTTCTCTTATCTATAGCTGTACTTGGCCTTCTGATTTTTTTTCATGAATCTGGTCATTTTTTAGCAGCAGTACT TCAAAAAATTAAAGTCAGTGGATTTTCAATTGGTTTCGGACCAGCTCTTTTGAAAAAGGAAATAAATGGGATTACTTATT CACTTAGATCGCTTCCTTTAGGTGGATTCGTTTCCTTTCCTGATGAAGAAACTGATTCACTAGTTCAACCTAATGACCCA GATCTTTTAAAGAATAGACCAATTCACCAAAGAGCAATAGTTATTTCAGCGGGTGTCATAGCAAATTTATTACTTGCTTG GATCGTACTTATTGGTCAAGCAAGCTTTGTAGGAATTCCTAATCAACCTGAGCCAGGAGTAATAATCATGGGAATCCAAC CAGATGAGCCTGCATTTAATTCTGGATTAGTGGCTGGAGATCGAATAATGAGCGTAAACGGGAAAGAATTAGGAAGCGGT AAGGAGGGAATTATGAATTTAGTCAATATCATTCAAAATTCATCGGGGGAAGAATTACTTTTTGAGAGAGTTAATGAAGA AGCAAACGATACAGTTTCTATAATTCCAGCTGAAAACGAAGGAAATGGGAGGATAGGAGCTCAATTGCAACCAAATCTTA CTAATGAAGTATCAAAAGCAAAAAATATTGGAGAAATATTTAATAGCTCGAATTCACAATTTTATGAATTACTAAGTCGA ACAGTTATTGGCTATAAAAGCTTGATTACTAATTTCTCTTCAACGGCTCAGCAGTTAAGTGGTCCAGTCAAAATTGTTGA AATTGGAGCTCAGCTCTCAGAGCAAGGGGGCTCAGGTCTTATACTATTTTCTGCTTTGGTTTCAATTAACCTTGCAGTTC TTAACTCGTTACCGTTGCCACTTCTAGATGGAGGACAACTTGTACTTCTAATTCTAGAAAGTATCAGAGGGAAGCCTGTT CCTGAAAAAATTCAATTAGCTTTTATGCAATCAGGATTTGTTTTACTTGTAGGACTAAGTGTTGTTTTGATAATCCGAGA TACTACTCAGCTAGCTTTAGTTCAACAGATTGTTCACAGACAATAA
Upstream 100 bases:
>100_bases GGTCAACAAAGCGATGGAAGTATCAATTTGCCAAAAGCCTTAATACCTTACTTCGGTTCAAACAAATTACAGCCAGAATA ACCCAATCAAAATCTAATTA
Downstream 100 bases:
>100_bases CTTCAAACTGTTTTTTATTTTCAATTAAAAAATATTTTGAAAATAAGTTTCCAGCAATTTCTTAAAACAATCAGGTAAGG AGTTAAAATGTTTATCAAAT
Product: membrane-associated Zn-dependent proteases 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNVLLSIAVLGLLIFFHESGHFLAAVLQKIKVSGFSIGFGPALLKKEINGITYSLRSLPLGGFVSFPDEETDSLVQPNDP DLLKNRPIHQRAIVISAGVIANLLLAWIVLIGQASFVGIPNQPEPGVIIMGIQPDEPAFNSGLVAGDRIMSVNGKELGSG KEGIMNLVNIIQNSSGEELLFERVNEEANDTVSIIPAENEGNGRIGAQLQPNLTNEVSKAKNIGEIFNSSNSQFYELLSR TVIGYKSLITNFSSTAQQLSGPVKIVEIGAQLSEQGGSGLILFSALVSINLAVLNSLPLPLLDGGQLVLLILESIRGKPV PEKIQLAFMQSGFVLLVGLSVVLIIRDTTQLALVQQIVHRQ
Sequences:
>Translated_361_residues MNVLLSIAVLGLLIFFHESGHFLAAVLQKIKVSGFSIGFGPALLKKEINGITYSLRSLPLGGFVSFPDEETDSLVQPNDP DLLKNRPIHQRAIVISAGVIANLLLAWIVLIGQASFVGIPNQPEPGVIIMGIQPDEPAFNSGLVAGDRIMSVNGKELGSG KEGIMNLVNIIQNSSGEELLFERVNEEANDTVSIIPAENEGNGRIGAQLQPNLTNEVSKAKNIGEIFNSSNSQFYELLSR TVIGYKSLITNFSSTAQQLSGPVKIVEIGAQLSEQGGSGLILFSALVSINLAVLNSLPLPLLDGGQLVLLILESIRGKPV PEKIQLAFMQSGFVLLVGLSVVLIIRDTTQLALVQQIVHRQ >Mature_361_residues MNVLLSIAVLGLLIFFHESGHFLAAVLQKIKVSGFSIGFGPALLKKEINGITYSLRSLPLGGFVSFPDEETDSLVQPNDP DLLKNRPIHQRAIVISAGVIANLLLAWIVLIGQASFVGIPNQPEPGVIIMGIQPDEPAFNSGLVAGDRIMSVNGKELGSG KEGIMNLVNIIQNSSGEELLFERVNEEANDTVSIIPAENEGNGRIGAQLQPNLTNEVSKAKNIGEIFNSSNSQFYELLSR TVIGYKSLITNFSSTAQQLSGPVKIVEIGAQLSEQGGSGLILFSALVSINLAVLNSLPLPLLDGGQLVLLILESIRGKPV PEKIQLAFMQSGFVLLVGLSVVLIIRDTTQLALVQQIVHRQ
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=214, Percent_Identity=31.7757009345794, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 38626; Mature: 38626
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLLSIAVLGLLIFFHESGHFLAAVLQKIKVSGFSIGFGPALLKKEINGITYSLRSLPL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHCCCEEHHHHCCC GGFVSFPDEETDSLVQPNDPDLLKNRPIHQRAIVISAGVIANLLLAWIVLIGQASFVGIP CCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHCCCCEECCC NQPEPGVIIMGIQPDEPAFNSGLVAGDRIMSVNGKELGSGKEGIMNLVNIIQNSSGEELL CCCCCCEEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHH FERVNEEANDTVSIIPAENEGNGRIGAQLQPNLTNEVSKAKNIGEIFNSSNSQFYELLSR HHHHCCCCCCEEEEEECCCCCCCEECCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH TVIGYKSLITNFSSTAQQLSGPVKIVEIGAQLSEQGGSGLILFSALVSINLAVLNSLPLP HHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC LLDGGQLVLLILESIRGKPVPEKIQLAFMQSGFVLLVGLSVVLIIRDTTQLALVQQIVHR CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEEECCCHHHHHHHHHHHC Q C >Mature Secondary Structure MNVLLSIAVLGLLIFFHESGHFLAAVLQKIKVSGFSIGFGPALLKKEINGITYSLRSLPL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHCCCEEHHHHCCC GGFVSFPDEETDSLVQPNDPDLLKNRPIHQRAIVISAGVIANLLLAWIVLIGQASFVGIP CCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHCCCCEECCC NQPEPGVIIMGIQPDEPAFNSGLVAGDRIMSVNGKELGSGKEGIMNLVNIIQNSSGEELL CCCCCCEEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHH FERVNEEANDTVSIIPAENEGNGRIGAQLQPNLTNEVSKAKNIGEIFNSSNSQFYELLSR HHHHCCCCCCEEEEEECCCCCCCEECCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH TVIGYKSLITNFSSTAQQLSGPVKIVEIGAQLSEQGGSGLILFSALVSINLAVLNSLPLP HHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCC LLDGGQLVLLILESIRGKPVPEKIQLAFMQSGFVLLVGLSVVLIIRDTTQLALVQQIVHR CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHEEEECCCHHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]