| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026346
Identifier: 124026346
GI number: 124026346
Start: 1337575
End: 1339914
Strand: Direct
Name: 124026346
Synonym: NATL1_16401
Alternate gene names: NA
Gene position: 1337575-1339914 (Clockwise)
Preceding gene: 124026344
Following gene: 124026349
Centisome position: 71.73
GC content: 26.11
Gene sequence:
>2340_bases TTGAGTGGTTTCGGGGAAAAGAAAAAAGAGAATAAAGGCTCTTCTAAAAAACTCCAAAAGCTTTCAGAAAAGGATCTGAA AGCAAAATCAATCAATAATCATATTAAAGGGAATTTAGATGAAGCAGAGAAAGGTTATATAGCTTTTTTAAGAAATGGTT ATTCTGATGCAGATATAATTTCAAATTATGCACTCATATGTGAAGGAAAAGGAGAAAATGAGAAAGCAATAAGATTATAC AAAAAATGTGCTAAAAGTTTTCCAAATCATATTTACTCAAAATTAAATTTATCTTTTTTATATTATAAATTAAATCAATT AGAAATAGCAGAAAAAATAATTGAAGAAGCAATTCAATTAAAGCCAAGCATGCCAAATGGGCATTGTATCAGAGGATTGA TTTTAAAAGGTTTAGATAAATATGATGAGTCAAGACTATCATTTGAGAAAGCAATCGAACTAGATAAAAATTACTTTGAT GCTTATATCAATCTAGGATTATTGAACAAAGATTCTAATAAATATAATGAAGCAGAAGAATGTTATTTAAAAGCATTAGA AATAAATAATAAATCTGCTATCGCTCATTTGAATCTAGGCGCATGCTACAAAGAGAAACAAGATCTAGATAAAGCCATTT TGCATACTAAGATGGCAATAGAGATAGATAATAAATTAGAAAACTGTTATTTAAATCTAGCTACAATATATAACCAAATT GGAGATTATAAAAAATCACTCTCACTTACAAAAAAAGAACTTTTATTGCATAAGCATAGTGAGTTAAGTTATCAACTTAT AAGTGAATTAATCAAAAAAGGAGAAGTATTAATCACATCGGAGAAAGATAATAGAGAATTACTTAAAAATTTATTAAATA GAAAAGATATATCTCATCGAGAACTATTTGGGAATATAAACAGCCTTATCTCGAAAGAAATATTAGAAGAATTATCTATT TTAGAATCGAAGTTGTATGAAAACAATAAATTTAATATTTTAATTAAGGACAAGGAATTAGTAAAAGCACTTTCTTTACT AATATTTTGCTCTCCATTATGGGAAAAGGTTTTAGGAAATATACGTAAGAATATTCTATTAAACTATTCAGATAAAGATA AAATAAGTAATAGTATTTTCAACTTTATAATAGGGCTTGGATCACAATGTTTCTTAAATGAGTATGTCTATTACATATCT ACAGAAGAAAAGGATAAACTAAAAGAACTTAAAAAGATAATCAATAATAATAAAAATCAAGACTATACATTAGCAATAAT TTCTTGCTACCAATCTCTATCTTCAATAAATGATGAAATAATTAATTTAAATACTTATATACCAAATAAAAAAGAATTAA ATAATCTTCTTAATTTACAATTTAAAGAGTTAAATGCTGAAAAAATGATTTCAAAAGGAATTAAAAAGATAGGAAATATA AAAGATTCAACATCTAAAGAAGTTAAAAACCAGTATGAATTAAACCCATATCCTAGATGGAGATACAATTCATATACTAA AGAAAACAAACTGAACTTTTTTTCAGTTATTAATTCAGAAATTTCACCGAATACAATTAAACCTAATTCAGCTCAATTAA CAAATAAAAAAATAAATATTCTTATAGCAGGTTGTGGAACGGGTATTCAAATAATTGAAGCATCTCGGTATAGTAATTGT GAAATAACAGCCATCGATCTAAGCAATTCAAGTATCTCATATGCAAAGAGAAAGGTCGATGAATATGGATTGAAAAATAT CAATTTTATAGAAATGGATTTACTTGAATTGACATCGCTAAATAAAAGATTTGATTTAATAGAATGTTCAGGTGTTCTTC ACCATATGAATGAGCCTATTAAGGGATTATCAAATCTATTTGAAGTATTAGAACCAGAAGGCTTTTTAAAGTTAGGTTTG TACAGCAAGTATGCAAGAGAAGAAATCCTAAAAGCAAGAAAACTAATCAAAGAAAAAGATATTAAACCAAACATTGATGG AATAAGAAACTTCCGAAATGATCTTCTGAATGGAGAAATTAAAGAGGTAAATGAGATAAGTAATTGGTCAGATTTCTACT CAACTTCAATGTGTAGAGATCTTTGCTTTCATATCCATGAAAACTGTTACACGCTAATCGAAATTAAAAACATGTTAAAA GTATCTAATCTGGAATTCCTAGGTTTTACTCTTTCAAAAGAAATTAGAGATAAGTATCAGATAGATAATAAAGATAAAGA CTCTTTAAAAAATTTAGAATTATGGGATAAATTTGAAAAATTAAATCCTAAATCTTTTAGAGAAATGTATCAATTCTGGT CTAGGAAATCAACTAAATAG
Upstream 100 bases:
>100_bases TAAATTACTATTAACTACAGTTTGGAAACTATAGATTTATTAAGCTAAAATAATTAGATTATTAACTTTTTGTATAATCA TATTAATTAAATAAAAATCA
Downstream 100 bases:
>100_bases TTGCTCTTCCAATCCTGGAATAAACATTTTACATAGGCTAAAAATAAATAATATTGCGAGAACATTACCAAGCATTGCTA TTGCAAAGCGAATTCTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MSGFGEKKKENKGSSKKLQKLSEKDLKAKSINNHIKGNLDEAEKGYIAFLRNGYSDADIISNYALICEGKGENEKAIRLY KKCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPNGHCIRGLILKGLDKYDESRLSFEKAIELDKNYFD AYINLGLLNKDSNKYNEAEECYLKALEINNKSAIAHLNLGACYKEKQDLDKAILHTKMAIEIDNKLENCYLNLATIYNQI GDYKKSLSLTKKELLLHKHSELSYQLISELIKKGEVLITSEKDNRELLKNLLNRKDISHRELFGNINSLISKEILEELSI LESKLYENNKFNILIKDKELVKALSLLIFCSPLWEKVLGNIRKNILLNYSDKDKISNSIFNFIIGLGSQCFLNEYVYYIS TEEKDKLKELKKIINNNKNQDYTLAIISCYQSLSSINDEIINLNTYIPNKKELNNLLNLQFKELNAEKMISKGIKKIGNI KDSTSKEVKNQYELNPYPRWRYNSYTKENKLNFFSVINSEISPNTIKPNSAQLTNKKINILIAGCGTGIQIIEASRYSNC EITAIDLSNSSISYAKRKVDEYGLKNINFIEMDLLELTSLNKRFDLIECSGVLHHMNEPIKGLSNLFEVLEPEGFLKLGL YSKYAREEILKARKLIKEKDIKPNIDGIRNFRNDLLNGEIKEVNEISNWSDFYSTSMCRDLCFHIHENCYTLIEIKNMLK VSNLEFLGFTLSKEIRDKYQIDNKDKDSLKNLELWDKFEKLNPKSFREMYQFWSRKSTK
Sequences:
>Translated_779_residues MSGFGEKKKENKGSSKKLQKLSEKDLKAKSINNHIKGNLDEAEKGYIAFLRNGYSDADIISNYALICEGKGENEKAIRLY KKCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPNGHCIRGLILKGLDKYDESRLSFEKAIELDKNYFD AYINLGLLNKDSNKYNEAEECYLKALEINNKSAIAHLNLGACYKEKQDLDKAILHTKMAIEIDNKLENCYLNLATIYNQI GDYKKSLSLTKKELLLHKHSELSYQLISELIKKGEVLITSEKDNRELLKNLLNRKDISHRELFGNINSLISKEILEELSI LESKLYENNKFNILIKDKELVKALSLLIFCSPLWEKVLGNIRKNILLNYSDKDKISNSIFNFIIGLGSQCFLNEYVYYIS TEEKDKLKELKKIINNNKNQDYTLAIISCYQSLSSINDEIINLNTYIPNKKELNNLLNLQFKELNAEKMISKGIKKIGNI KDSTSKEVKNQYELNPYPRWRYNSYTKENKLNFFSVINSEISPNTIKPNSAQLTNKKINILIAGCGTGIQIIEASRYSNC EITAIDLSNSSISYAKRKVDEYGLKNINFIEMDLLELTSLNKRFDLIECSGVLHHMNEPIKGLSNLFEVLEPEGFLKLGL YSKYAREEILKARKLIKEKDIKPNIDGIRNFRNDLLNGEIKEVNEISNWSDFYSTSMCRDLCFHIHENCYTLIEIKNMLK VSNLEFLGFTLSKEIRDKYQIDNKDKDSLKNLELWDKFEKLNPKSFREMYQFWSRKSTK >Mature_778_residues SGFGEKKKENKGSSKKLQKLSEKDLKAKSINNHIKGNLDEAEKGYIAFLRNGYSDADIISNYALICEGKGENEKAIRLYK KCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQLKPSMPNGHCIRGLILKGLDKYDESRLSFEKAIELDKNYFDA YINLGLLNKDSNKYNEAEECYLKALEINNKSAIAHLNLGACYKEKQDLDKAILHTKMAIEIDNKLENCYLNLATIYNQIG DYKKSLSLTKKELLLHKHSELSYQLISELIKKGEVLITSEKDNRELLKNLLNRKDISHRELFGNINSLISKEILEELSIL ESKLYENNKFNILIKDKELVKALSLLIFCSPLWEKVLGNIRKNILLNYSDKDKISNSIFNFIIGLGSQCFLNEYVYYIST EEKDKLKELKKIINNNKNQDYTLAIISCYQSLSSINDEIINLNTYIPNKKELNNLLNLQFKELNAEKMISKGIKKIGNIK DSTSKEVKNQYELNPYPRWRYNSYTKENKLNFFSVINSEISPNTIKPNSAQLTNKKINILIAGCGTGIQIIEASRYSNCE ITAIDLSNSSISYAKRKVDEYGLKNINFIEMDLLELTSLNKRFDLIECSGVLHHMNEPIKGLSNLFEVLEPEGFLKLGLY SKYAREEILKARKLIKEKDIKPNIDGIRNFRNDLLNGEIKEVNEISNWSDFYSTSMCRDLCFHIHENCYTLIEIKNMLKV SNLEFLGFTLSKEIRDKYQIDNKDKDSLKNLELWDKFEKLNPKSFREMYQFWSRKSTK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI32307150, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115532690, Length=175, Percent_Identity=29.7142857142857, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115532692, Length=175, Percent_Identity=29.7142857142857, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI17647755, Length=283, Percent_Identity=26.8551236749117, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24585827, Length=283, Percent_Identity=26.8551236749117, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24585829, Length=283, Percent_Identity=26.8551236749117, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647123, Length=208, Percent_Identity=25.9615384615385, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076610, Length=196, Percent_Identity=26.0204081632653, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI19920486, Length=196, Percent_Identity=26.0204081632653, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 90270; Mature: 90139
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFGEKKKENKGSSKKLQKLSEKDLKAKSINNHIKGNLDEAEKGYIAFLRNGYSDADII CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHH SNYALICEGKGENEKAIRLYKKCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHC KPSMPNGHCIRGLILKGLDKYDESRLSFEKAIELDKNYFDAYINLGLLNKDSNKYNEAEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH CYLKALEINNKSAIAHLNLGACYKEKQDLDKAILHTKMAIEIDNKLENCYLNLATIYNQI HHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH GDYKKSLSLTKKELLLHKHSELSYQLISELIKKGEVLITSEKDNRELLKNLLNRKDISHR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCHH ELFGNINSLISKEILEELSILESKLYENNKFNILIKDKELVKALSLLIFCSPLWEKVLGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH IRKNILLNYSDKDKISNSIFNFIIGLGSQCFLNEYVYYISTEEKDKLKELKKIINNNKNQ HHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCC DYTLAIISCYQSLSSINDEIINLNTYIPNKKELNNLLNLQFKELNAEKMISKGIKKIGNI CHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCC KDSTSKEVKNQYELNPYPRWRYNSYTKENKLNFFSVINSEISPNTIKPNSAQLTNKKINI CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEE LIAGCGTGIQIIEASRYSNCEITAIDLSNSSISYAKRKVDEYGLKNINFIEMDLLELTSL EEEECCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHC NKRFDLIECSGVLHHMNEPIKGLSNLFEVLEPEGFLKLGLYSKYAREEILKARKLIKEKD CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC IKPNIDGIRNFRNDLLNGEIKEVNEISNWSDFYSTSMCRDLCFHIHENCYTLIEIKNMLK CCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNLEFLGFTLSKEIRDKYQIDNKDKDSLKNLELWDKFEKLNPKSFREMYQFWSRKSTK HCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGFGEKKKENKGSSKKLQKLSEKDLKAKSINNHIKGNLDEAEKGYIAFLRNGYSDADII CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHH SNYALICEGKGENEKAIRLYKKCAKSFPNHIYSKLNLSFLYYKLNQLEIAEKIIEEAIQL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHC KPSMPNGHCIRGLILKGLDKYDESRLSFEKAIELDKNYFDAYINLGLLNKDSNKYNEAEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH CYLKALEINNKSAIAHLNLGACYKEKQDLDKAILHTKMAIEIDNKLENCYLNLATIYNQI HHHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHH GDYKKSLSLTKKELLLHKHSELSYQLISELIKKGEVLITSEKDNRELLKNLLNRKDISHR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCHH ELFGNINSLISKEILEELSILESKLYENNKFNILIKDKELVKALSLLIFCSPLWEKVLGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH IRKNILLNYSDKDKISNSIFNFIIGLGSQCFLNEYVYYISTEEKDKLKELKKIINNNKNQ HHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCC DYTLAIISCYQSLSSINDEIINLNTYIPNKKELNNLLNLQFKELNAEKMISKGIKKIGNI CHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCC KDSTSKEVKNQYELNPYPRWRYNSYTKENKLNFFSVINSEISPNTIKPNSAQLTNKKINI CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEE LIAGCGTGIQIIEASRYSNCEITAIDLSNSSISYAKRKVDEYGLKNINFIEMDLLELTSL EEEECCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHC NKRFDLIECSGVLHHMNEPIKGLSNLFEVLEPEGFLKLGLYSKYAREEILKARKLIKEKD CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCC IKPNIDGIRNFRNDLLNGEIKEVNEISNWSDFYSTSMCRDLCFHIHENCYTLIEIKNMLK CCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNLEFLGFTLSKEIRDKYQIDNKDKDSLKNLELWDKFEKLNPKSFREMYQFWSRKSTK HCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]