| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026291
Identifier: 124026291
GI number: 124026291
Start: 1291918
End: 1292706
Strand: Reverse
Name: 124026291
Synonym: NATL1_15851
Alternate gene names: NA
Gene position: 1292706-1291918 (Counterclockwise)
Preceding gene: 124026292
Following gene: 124026290
Centisome position: 69.32
GC content: 38.28
Gene sequence:
>789_bases ATGGGCAGCAATACGTGGCTGATTTCAGGATCGCCAGGCTGTGGCAAAACGAATTGGATCCTTAATAATCTCAAGTCACA CAAAGGTAGTTGTGGCTTTTTGCGTCTATCTGGTTACGGAGATATTGATCTACAGCAAGTAGCTTCTACGGATATTGACT ATGCCTTTCTTAAAGATCAAATTCCTCAATTAATAGATTTATCAAGCTCCAGTGCAGACTCTATTTCGCATCAAGATGAT TCTTTTATATTTATTGAGCTTCCTCAGTTTCGAATTCCTAAAGAGCTTGGTTTGGCTGGAATTGATCCGCGCATAATCAA ACAACTTGCAACTTTAAACCTCGAACCAGATAAATACCTTCATTTTGGACGTGATATGGAATTACCAATTAATGACACAT TAAATTTCAATCAAATTGAATCATGCAGGTTCAAGCTTCATCGGAATGTTTGGGATCCACCTAGTCTGAATACCTTTTGG TTCGAGCTGGTTAATGGTGCTTATGGAGATGTTTATAGAGCTAAAGCCTTGATGAATATCCCCGATGGTAGATCTATGTT CTTTAACTGGATTGTTAGTCAAAAAGGTTCGCAATTTTTACCTCTTAATACTGTCTCACCTCCAAGTGGTAGACCTACAA GAATATCTGAACTTGTTGTTCAAGGGAAAAATCTTGACTCTGTACGAATTGAATCAACTATTGAGCTTTGTCTCTTGAAT GATTCAGTTTTGGAGCTTCATCAAGCCCCTCTTAGAGATACACAAATGCAGCCTAGTTTTTCAACCTGA
Upstream 100 bases:
>100_bases AGACAGGATGTCTAAATAATCAAATATCAAGGTACTAAAATAATAATGATTATCGTTTTCATATTCAGTGTATATTCTTA TACATTGATTTGTGTGCTGT
Downstream 100 bases:
>100_bases CGATATGAAACACGCAGTAATTTCCTGTTTACATGCCAATCTCTCAGCAGTGGAAGCTGTGCTAGGTGATATTGATCGGC AAGGTATTGAGACCATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGSNTWLISGSPGCGKTNWILNNLKSHKGSCGFLRLSGYGDIDLQQVASTDIDYAFLKDQIPQLIDLSSSSADSISHQDD SFIFIELPQFRIPKELGLAGIDPRIIKQLATLNLEPDKYLHFGRDMELPINDTLNFNQIESCRFKLHRNVWDPPSLNTFW FELVNGAYGDVYRAKALMNIPDGRSMFFNWIVSQKGSQFLPLNTVSPPSGRPTRISELVVQGKNLDSVRIESTIELCLLN DSVLELHQAPLRDTQMQPSFST
Sequences:
>Translated_262_residues MGSNTWLISGSPGCGKTNWILNNLKSHKGSCGFLRLSGYGDIDLQQVASTDIDYAFLKDQIPQLIDLSSSSADSISHQDD SFIFIELPQFRIPKELGLAGIDPRIIKQLATLNLEPDKYLHFGRDMELPINDTLNFNQIESCRFKLHRNVWDPPSLNTFW FELVNGAYGDVYRAKALMNIPDGRSMFFNWIVSQKGSQFLPLNTVSPPSGRPTRISELVVQGKNLDSVRIESTIELCLLN DSVLELHQAPLRDTQMQPSFST >Mature_261_residues GSNTWLISGSPGCGKTNWILNNLKSHKGSCGFLRLSGYGDIDLQQVASTDIDYAFLKDQIPQLIDLSSSSADSISHQDDS FIFIELPQFRIPKELGLAGIDPRIIKQLATLNLEPDKYLHFGRDMELPINDTLNFNQIESCRFKLHRNVWDPPSLNTFWF ELVNGAYGDVYRAKALMNIPDGRSMFFNWIVSQKGSQFLPLNTVSPPSGRPTRISELVVQGKNLDSVRIESTIELCLLND SVLELHQAPLRDTQMQPSFST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29464; Mature: 29333
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNTWLISGSPGCGKTNWILNNLKSHKGSCGFLRLSGYGDIDLQQVASTDIDYAFLKDQ CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHH IPQLIDLSSSSADSISHQDDSFIFIELPQFRIPKELGLAGIDPRIIKQLATLNLEPDKYL HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHH HFGRDMELPINDTLNFNQIESCRFKLHRNVWDPPSLNTFWFELVNGAYGDVYRAKALMNI CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEC PDGRSMFFNWIVSQKGSQFLPLNTVSPPSGRPTRISELVVQGKNLDSVRIESTIELCLLN CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCEEEEEEEC DSVLELHQAPLRDTQMQPSFST HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GSNTWLISGSPGCGKTNWILNNLKSHKGSCGFLRLSGYGDIDLQQVASTDIDYAFLKDQ CCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHH IPQLIDLSSSSADSISHQDDSFIFIELPQFRIPKELGLAGIDPRIIKQLATLNLEPDKYL HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHH HFGRDMELPINDTLNFNQIESCRFKLHRNVWDPPSLNTFWFELVNGAYGDVYRAKALMNI CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEC PDGRSMFFNWIVSQKGSQFLPLNTVSPPSGRPTRISELVVQGKNLDSVRIESTIELCLLN CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCEEEEEEEC DSVLELHQAPLRDTQMQPSFST HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA