| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026274
Identifier: 124026274
GI number: 124026274
Start: 1274009
End: 1274602
Strand: Reverse
Name: 124026274
Synonym: NATL1_15681
Alternate gene names: NA
Gene position: 1274602-1274009 (Counterclockwise)
Preceding gene: 124026275
Following gene: 124026267
Centisome position: 68.35
GC content: 29.8
Gene sequence:
>594_bases ATGACTAAAAGTCAGTTTAATATAAAAATCTCAAAAGACTTATTGATTAAAATTAAGCGACAGGCAATGATGTCTGGTAA AAGTCTAACTGAACATATTACTGATTTAGTTACTAAGTCCTTATCTGATAATGATATCCAAAATATTGATTTGTCTTCAG TTAACAAGATAAAAGATTTAGAAAAACGGTTATTGTCTCTTGAATCAATAGTGAGTAATCGTGAATACTTAAGTCAAAAG TTAAAACCATTTACTAATTCTGAAGCAATTAATTGTACAAAATTTATGAGAGCTGTTTTTGATAAAGAATTAAAAAAAAG AAATTATGACAATAAATCCGAGGCATTTGAAGATTTTCTTCAGTCAGTACAAGTTTATGAGGGTTTAAATAAGTCGTTCT CTGATCGTTTGAAAGAAATAATGCTTGGCGATAAGTCATCTCCTTGGACAGGTAGAGAACTCAATGAATTAACTGGTGAG GATAAATGTAATTGCTCAATTAGAAAAGGCTTAATTCATTGGACTGGAAAAACAGAGTACCCTTCACAACAAGAAATATG TGACAAAGGAGAAGAATTACTTCCTTTGTTTTGA
Upstream 100 bases:
>100_bases AAACTATTTTTTTTTGTTTGAAGAGAATCCTTTTCTCTCAACATATTCTTGCTATTATTAAACAATTGATTATAGTTGTC CCAGTCATGTCTCTAAATAA
Downstream 100 bases:
>100_bases AAGGATATCAAACACCTTTTATAAGTTTTTCGCTTATTTCCCACAATTTTTTTCTTGAAGTTTGATTTAATGCTTTTGGA GCATTGCTACATATTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTKSQFNIKISKDLLIKIKRQAMMSGKSLTEHITDLVTKSLSDNDIQNIDLSSVNKIKDLEKRLLSLESIVSNREYLSQK LKPFTNSEAINCTKFMRAVFDKELKKRNYDNKSEAFEDFLQSVQVYEGLNKSFSDRLKEIMLGDKSSPWTGRELNELTGE DKCNCSIRKGLIHWTGKTEYPSQQEICDKGEELLPLF
Sequences:
>Translated_197_residues MTKSQFNIKISKDLLIKIKRQAMMSGKSLTEHITDLVTKSLSDNDIQNIDLSSVNKIKDLEKRLLSLESIVSNREYLSQK LKPFTNSEAINCTKFMRAVFDKELKKRNYDNKSEAFEDFLQSVQVYEGLNKSFSDRLKEIMLGDKSSPWTGRELNELTGE DKCNCSIRKGLIHWTGKTEYPSQQEICDKGEELLPLF >Mature_196_residues TKSQFNIKISKDLLIKIKRQAMMSGKSLTEHITDLVTKSLSDNDIQNIDLSSVNKIKDLEKRLLSLESIVSNREYLSQKL KPFTNSEAINCTKFMRAVFDKELKKRNYDNKSEAFEDFLQSVQVYEGLNKSFSDRLKEIMLGDKSSPWTGRELNELTGED KCNCSIRKGLIHWTGKTEYPSQQEICDKGEELLPLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22725; Mature: 22594
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSQFNIKISKDLLIKIKRQAMMSGKSLTEHITDLVTKSLSDNDIQNIDLSSVNKIKDL CCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EKRLLSLESIVSNREYLSQKLKPFTNSEAINCTKFMRAVFDKELKKRNYDNKSEAFEDFL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QSVQVYEGLNKSFSDRLKEIMLGDKSSPWTGRELNELTGEDKCNCSIRKGLIHWTGKTEY HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCEEEECCCCCC PSQQEICDKGEELLPLF CCHHHHHHCCCCCCCCC >Mature Secondary Structure TKSQFNIKISKDLLIKIKRQAMMSGKSLTEHITDLVTKSLSDNDIQNIDLSSVNKIKDL CCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EKRLLSLESIVSNREYLSQKLKPFTNSEAINCTKFMRAVFDKELKKRNYDNKSEAFEDFL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QSVQVYEGLNKSFSDRLKEIMLGDKSSPWTGRELNELTGEDKCNCSIRKGLIHWTGKTEY HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHCEEEECCCCCC PSQQEICDKGEELLPLF CCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA