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The map label for this gene is 124026254

Identifier: 124026254

GI number: 124026254

Start: 1259272

End: 1259826

Strand: Reverse

Name: 124026254

Synonym: NATL1_15481

Alternate gene names: NA

Gene position: 1259826-1259272 (Counterclockwise)

Preceding gene: 124026256

Following gene: 124026253

Centisome position: 67.56

GC content: 38.02

Gene sequence:

>555_bases
ATGAAATTTGATCTTCTTTTTTCAAAAATTATCAAATATGTACTCAGCTTTTTAATCATATTTTTTGGGGTGACCCCTGT
ATTTGCTGGTGCCAATGTGGCAGTTAAGGGTGAAGGAGACGAAGTTCCAAGTTATGTTCGTTCTGATATCACAGGATTCG
ATTTTCATGGTGAAGACTTACATCTTTCCTCTATTGCTGGTGCAATGGCAAGAGATGCTGATTTCAGTAATGTCGATCTT
CATGGAACAACACTAACTTTGTCAGACCTCAAAGGTTCCAACCTTAATGGTGTAGATCTTACTGATACACTTTCGGACAG
GGTTAATTTTCAGAAGACCGATCTTAGGAATTCCATTTTAGTAAATATGATTGCATCAGGTAGCAGTTTTGCTGGTGCTC
AAATTGAAGGAGCTGATTTTACATTTGCGATTCTTGACAGTGAAGATCAAAGAAATCTCTGTAAAATAGCTGACGGTGTG
AATCCAACTACAGGAGTTTCTACTAGGGCTAGTCTTGAATGTAAAGGAGATAAACCTTCTATACCTGCAGCGTAA

Upstream 100 bases:

>100_bases
CTTGATAATCCTTCTTACATTAATTTGTCTTATCAATGTACTTAAAATTCTTTAATAGGAGAGATAATTGCATTAATCAG
GTGGATTATCATTTTTACTC

Downstream 100 bases:

>100_bases
AATCTAAGAATCGATCGAAATTATTTGTTAATAAAAAAGAGAATTACTTGCAATTCTCTTTTTCTTAGTTTTCTTAAAAA
AAGAAACTTGATTTATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKFDLLFSKIIKYVLSFLIIFFGVTPVFAGANVAVKGEGDEVPSYVRSDITGFDFHGEDLHLSSIAGAMARDADFSNVDL
HGTTLTLSDLKGSNLNGVDLTDTLSDRVNFQKTDLRNSILVNMIASGSSFAGAQIEGADFTFAILDSEDQRNLCKIADGV
NPTTGVSTRASLECKGDKPSIPAA

Sequences:

>Translated_184_residues
MKFDLLFSKIIKYVLSFLIIFFGVTPVFAGANVAVKGEGDEVPSYVRSDITGFDFHGEDLHLSSIAGAMARDADFSNVDL
HGTTLTLSDLKGSNLNGVDLTDTLSDRVNFQKTDLRNSILVNMIASGSSFAGAQIEGADFTFAILDSEDQRNLCKIADGV
NPTTGVSTRASLECKGDKPSIPAA
>Mature_184_residues
MKFDLLFSKIIKYVLSFLIIFFGVTPVFAGANVAVKGEGDEVPSYVRSDITGFDFHGEDLHLSSIAGAMARDADFSNVDL
HGTTLTLSDLKGSNLNGVDLTDTLSDRVNFQKTDLRNSILVNMIASGSSFAGAQIEGADFTFAILDSEDQRNLCKIADGV
NPTTGVSTRASLECKGDKPSIPAA

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19617; Mature: 19617

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDLLFSKIIKYVLSFLIIFFGVTPVFAGANVAVKGEGDEVPSYVRSDITGFDFHGEDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCE
HLSSIAGAMARDADFSNVDLHGTTLTLSDLKGSNLNGVDLTDTLSDRVNFQKTDLRNSIL
EHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHE
VNMIASGSSFAGAQIEGADFTFAILDSEDQRNLCKIADGVNPTTGVSTRASLECKGDKPS
EEEEECCCCCCCCEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCC
IPAA
CCCC
>Mature Secondary Structure
MKFDLLFSKIIKYVLSFLIIFFGVTPVFAGANVAVKGEGDEVPSYVRSDITGFDFHGEDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCE
HLSSIAGAMARDADFSNVDLHGTTLTLSDLKGSNLNGVDLTDTLSDRVNFQKTDLRNSIL
EHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHE
VNMIASGSSFAGAQIEGADFTFAILDSEDQRNLCKIADGVNPTTGVSTRASLECKGDKPS
EEEEECCCCCCCCEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCC
IPAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA