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The map label for this gene is ddpA [H]

Identifier: 124026244

GI number: 124026244

Start: 1251281

End: 1252858

Strand: Direct

Name: ddpA [H]

Synonym: NATL1_15381

Alternate gene names: 124026244

Gene position: 1251281-1252858 (Clockwise)

Preceding gene: 124026243

Following gene: 124026245

Centisome position: 67.1

GC content: 31.37

Gene sequence:

>1578_bases
ATGATAAAACTAAATTGTATAAAAAATATTTTAAAAGTATCAAGTATTCTCCTAATACTCATACAGTTATCTTGCTCCCA
ATATAAGAAAAGAGAAAATATTATTGTTGCAAGTGCAGGTAAAATTGAATCACTTGACCCTGCTCAAGCAAATACACTCA
GGACATTACAAATATTAAGCGCTCTTGGAGATACTCTATACAAAATAAATAAGGAAGGGAATCTATCACCAAGCTTAGCT
AAAGATTTACCAAAAGTAAGTAAGAATGGTTTGCTAATAGATATTCCACTCAAAGAAAATATTTCTTTTCACGATGGAAG
TATTTTCAATGCAGAAGCGATGGCGTTTAGTCTTAATCGATTCAGAAAAATTGGAACTTTAAATTACCTATTAAATGACA
AAATAGAGGATATTGAAGTCAAAGGAAAATTTCTTTTAAGAATAAAATTAAAAAAACCATCGAGTTCATTAGCAAGTCTT
TTAACATCAGTAAATTTGACACCTGTCTCTCCTGATTCATATTCAAACTATAAAGATAGTTTCAATAATAAAAAGTTTGT
AGGGACAGGACCTTATTTCTTAGAAAGTTTCAACTCAAGTCAACAAATAATAAAGCCATTCAAAAATTATTGGGGAGAAA
AACCCCTAAATAAAGGTATTAACTTTATAAATTATAGTAATTCTAGTACTCTTTTTGGAGCTATAAAAACAAAGGAAGTT
GACGTCCTCATCTCAAATTCTATAGATGATTTGCAGCGATTAACATTAAATAATATGGCTAAGAAAGATCAACTAAAATC
CGGAGAGGGTGATCCAATAGAGATAGGATACATTACATTTAAAAGCAATAAATTACCTTTAGAAAATAAAGTAGTTAGGA
AGGCTCTTTCCTACACTATTGATAGAGAATTAATTAGTCAACAAGTAAGTTTCGGAACAAGAGAACCATTAAGATCAATT
GTGCCTCCTCAACTACATAAAAAAGAATTTAAGCCATGGCCTAAATATAATCCTAATACTGCAAGATCTTTATTAAAAAC
AGAAGGCTACTGTGTAACAGAGATTCTTTCTATTCCATTAACATTTAGATCTAATGTACCTGCAGATAAATTACTTGCCC
TTACTTGGAGAGATCAAATCAAAAGAGATTTATCTGATTGTTTAGAAATAACTTTAAATGGAATTGAGTCAACCACAGTC
TACAAACAACTTTCCGAAGGGGCTTTTGAAGCGGTTATATTAGATTGGACTGGGGCATATCCTGACCCAGAAGCATATTT
AACTCCCTTACTAAGTTGTAATGAACTAAATAATAATTCTTGCCTCAAGGGTGAAGCTGTATTCAGTGGTAGTTTTTGGG
GTGATAAAAAATTACAAGAACTCTTGGAGAAAAGTGAAGAACTAGATGGAGAAAACAGACTAAATAATTTAATAAAAGTT
GAAAAACTTGCAGCACAAGGAGGTGCCTACTTACCAATTTGGCTCGTTAATCCTAAAGCTTGGTCTCTAAAAGATATAAG
CCAACCAGAATTTTCAAAAGATGGATTAATTATCCTGAAAAACTTAGAGAGAGACTAG

Upstream 100 bases:

>100_bases
TGCTAATGGATCGCCTGTTTTCGAGATATCAATTAAACAAGTATCTCCAAATCAATAAATATTTTTCTCAGGTAGAAGTA
ATTATAAAATCTCATACTAA

Downstream 100 bases:

>100_bases
TTTTGTCAACTAAAAAGGCACTTTTCAAATATATCCTTTCAAGATTAACTCTATTGCCAATAATGCTTTGGATCATTTCG
AGCTTAGTTTTTATATTATT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MIKLNCIKNILKVSSILLILIQLSCSQYKKRENIIVASAGKIESLDPAQANTLRTLQILSALGDTLYKINKEGNLSPSLA
KDLPKVSKNGLLIDIPLKENISFHDGSIFNAEAMAFSLNRFRKIGTLNYLLNDKIEDIEVKGKFLLRIKLKKPSSSLASL
LTSVNLTPVSPDSYSNYKDSFNNKKFVGTGPYFLESFNSSQQIIKPFKNYWGEKPLNKGINFINYSNSSTLFGAIKTKEV
DVLISNSIDDLQRLTLNNMAKKDQLKSGEGDPIEIGYITFKSNKLPLENKVVRKALSYTIDRELISQQVSFGTREPLRSI
VPPQLHKKEFKPWPKYNPNTARSLLKTEGYCVTEILSIPLTFRSNVPADKLLALTWRDQIKRDLSDCLEITLNGIESTTV
YKQLSEGAFEAVILDWTGAYPDPEAYLTPLLSCNELNNNSCLKGEAVFSGSFWGDKKLQELLEKSEELDGENRLNNLIKV
EKLAAQGGAYLPIWLVNPKAWSLKDISQPEFSKDGLIILKNLERD

Sequences:

>Translated_525_residues
MIKLNCIKNILKVSSILLILIQLSCSQYKKRENIIVASAGKIESLDPAQANTLRTLQILSALGDTLYKINKEGNLSPSLA
KDLPKVSKNGLLIDIPLKENISFHDGSIFNAEAMAFSLNRFRKIGTLNYLLNDKIEDIEVKGKFLLRIKLKKPSSSLASL
LTSVNLTPVSPDSYSNYKDSFNNKKFVGTGPYFLESFNSSQQIIKPFKNYWGEKPLNKGINFINYSNSSTLFGAIKTKEV
DVLISNSIDDLQRLTLNNMAKKDQLKSGEGDPIEIGYITFKSNKLPLENKVVRKALSYTIDRELISQQVSFGTREPLRSI
VPPQLHKKEFKPWPKYNPNTARSLLKTEGYCVTEILSIPLTFRSNVPADKLLALTWRDQIKRDLSDCLEITLNGIESTTV
YKQLSEGAFEAVILDWTGAYPDPEAYLTPLLSCNELNNNSCLKGEAVFSGSFWGDKKLQELLEKSEELDGENRLNNLIKV
EKLAAQGGAYLPIWLVNPKAWSLKDISQPEFSKDGLIILKNLERD
>Mature_525_residues
MIKLNCIKNILKVSSILLILIQLSCSQYKKRENIIVASAGKIESLDPAQANTLRTLQILSALGDTLYKINKEGNLSPSLA
KDLPKVSKNGLLIDIPLKENISFHDGSIFNAEAMAFSLNRFRKIGTLNYLLNDKIEDIEVKGKFLLRIKLKKPSSSLASL
LTSVNLTPVSPDSYSNYKDSFNNKKFVGTGPYFLESFNSSQQIIKPFKNYWGEKPLNKGINFINYSNSSTLFGAIKTKEV
DVLISNSIDDLQRLTLNNMAKKDQLKSGEGDPIEIGYITFKSNKLPLENKVVRKALSYTIDRELISQQVSFGTREPLRSI
VPPQLHKKEFKPWPKYNPNTARSLLKTEGYCVTEILSIPLTFRSNVPADKLLALTWRDQIKRDLSDCLEITLNGIESTTV
YKQLSEGAFEAVILDWTGAYPDPEAYLTPLLSCNELNNNSCLKGEAVFSGSFWGDKKLQELLEKSEELDGENRLNNLIKV
EKLAAQGGAYLPIWLVNPKAWSLKDISQPEFSKDGLIILKNLERD

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=455, Percent_Identity=24.6153846153846, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789887, Length=475, Percent_Identity=24.6315789473684, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1789966, Length=514, Percent_Identity=21.5953307392996, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787551, Length=492, Percent_Identity=22.3577235772358, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI87081878, Length=433, Percent_Identity=23.094688221709, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787762, Length=476, Percent_Identity=20.3781512605042, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58954; Mature: 58954

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLNCIKNILKVSSILLILIQLSCSQYKKRENIIVASAGKIESLDPAQANTLRTLQILS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHH
ALGDTLYKINKEGNLSPSLAKDLPKVSKNGLLIDIPLKENISFHDGSIFNAEAMAFSLNR
HHHHHHEEECCCCCCCHHHHHHCHHHCCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHH
FRKIGTLNYLLNDKIEDIEVKGKFLLRIKLKKPSSSLASLLTSVNLTPVSPDSYSNYKDS
HHHHHHHHHHHCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
FNNKKFVGTGPYFLESFNSSQQIIKPFKNYWGEKPLNKGINFINYSNSSTLFGAIKTKEV
CCCCEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCEE
DVLISNSIDDLQRLTLNNMAKKDQLKSGEGDPIEIGYITFKSNKLPLENKVVRKALSYTI
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
DRELISQQVSFGTREPLRSIVPPQLHKKEFKPWPKYNPNTARSLLKTEGYCVTEILSIPL
HHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHCCE
TFRSNVPADKLLALTWRDQIKRDLSDCLEITLNGIESTTVYKQLSEGAFEAVILDWTGAY
EECCCCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCC
PDPEAYLTPLLSCNELNNNSCLKGEAVFSGSFWGDKKLQELLEKSEELDGENRLNNLIKV
CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EKLAAQGGAYLPIWLVNPKAWSLKDISQPEFSKDGLIILKNLERD
HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MIKLNCIKNILKVSSILLILIQLSCSQYKKRENIIVASAGKIESLDPAQANTLRTLQILS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHH
ALGDTLYKINKEGNLSPSLAKDLPKVSKNGLLIDIPLKENISFHDGSIFNAEAMAFSLNR
HHHHHHEEECCCCCCCHHHHHHCHHHCCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHH
FRKIGTLNYLLNDKIEDIEVKGKFLLRIKLKKPSSSLASLLTSVNLTPVSPDSYSNYKDS
HHHHHHHHHHHCCCCCCEEECCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHH
FNNKKFVGTGPYFLESFNSSQQIIKPFKNYWGEKPLNKGINFINYSNSSTLFGAIKTKEV
CCCCEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCEE
DVLISNSIDDLQRLTLNNMAKKDQLKSGEGDPIEIGYITFKSNKLPLENKVVRKALSYTI
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
DRELISQQVSFGTREPLRSIVPPQLHKKEFKPWPKYNPNTARSLLKTEGYCVTEILSIPL
HHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHCCE
TFRSNVPADKLLALTWRDQIKRDLSDCLEITLNGIESTTVYKQLSEGAFEAVILDWTGAY
EECCCCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCC
PDPEAYLTPLLSCNELNNNSCLKGEAVFSGSFWGDKKLQELLEKSEELDGENRLNNLIKV
CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
EKLAAQGGAYLPIWLVNPKAWSLKDISQPEFSKDGLIILKNLERD
HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA