Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026206

Identifier: 124026206

GI number: 124026206

Start: 1212229

End: 1212762

Strand: Direct

Name: 124026206

Synonym: NATL1_15001

Alternate gene names: NA

Gene position: 1212229-1212762 (Clockwise)

Preceding gene: 124026205

Following gene: 124026209

Centisome position: 65.01

GC content: 26.22

Gene sequence:

>534_bases
ATGGCATTAAATTTTCCTTTTAAAAAATCCTCGACAGGCTTATCTGATTCTAATAATAAACCTCGCTCTGATAATGAATT
TTCTGAGGCAATTAATTTATTTAAAACTCAAAGAGTGAAAATTGGAATTTCATTAGAGACACTCTCAAAAGAGACAAAAA
TCTCAAGGAATGTACTAATAGCTATTGAAAATGGATGGAAAAAATATTTACCCGAAAAAACTTATTTAATTTCGATGATC
AAAAGTCTTGAGCTTAAGCTCAATTTAGAGAAAGGAAGTTTAAATGGTTTGTCAATACAAAAAGATAGTATTAATAATGT
ATCGAAATTTAAACTTAATTTTATAAATATAGACTTTCTTAATAGCTGGATTGGAAGCCTATTGTATTTTATAATTATGC
TTTTATCAATATTAGCTCTTAATAGTCAGCAAAAATATCTTATACAAATAAATAGTATTTCCACAGAACCTATTAAGATG
GAAAAAACTTTTATGGAAGATGGGAACGTAATTAATAAAGCAAAAGAAAACTAA

Upstream 100 bases:

>100_bases
AGAAATAGATGATTTTTTCTGATTAATTTAGATTCTATCTACTTTTTCCAAACCTAGCTAAAATACAAATGAATATATAA
TGTAGAAATACTTATGTTTT

Downstream 100 bases:

>100_bases
TTTTATCTTTTATTTGCTTTAGCTAAATCACCATATTTTTTCAAAGCATCTCTAATATTTAAATCATTTCTCGTTAATCT
CCATGACCAATTATTTTCTG

Product: helix-turn-helix

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MALNFPFKKSSTGLSDSNNKPRSDNEFSEAINLFKTQRVKIGISLETLSKETKISRNVLIAIENGWKKYLPEKTYLISMI
KSLELKLNLEKGSLNGLSIQKDSINNVSKFKLNFINIDFLNSWIGSLLYFIIMLLSILALNSQQKYLIQINSISTEPIKM
EKTFMEDGNVINKAKEN

Sequences:

>Translated_177_residues
MALNFPFKKSSTGLSDSNNKPRSDNEFSEAINLFKTQRVKIGISLETLSKETKISRNVLIAIENGWKKYLPEKTYLISMI
KSLELKLNLEKGSLNGLSIQKDSINNVSKFKLNFINIDFLNSWIGSLLYFIIMLLSILALNSQQKYLIQINSISTEPIKM
EKTFMEDGNVINKAKEN
>Mature_176_residues
ALNFPFKKSSTGLSDSNNKPRSDNEFSEAINLFKTQRVKIGISLETLSKETKISRNVLIAIENGWKKYLPEKTYLISMIK
SLELKLNLEKGSLNGLSIQKDSINNVSKFKLNFINIDFLNSWIGSLLYFIIMLLSILALNSQQKYLIQINSISTEPIKME
KTFMEDGNVINKAKEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20173; Mature: 20042

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNFPFKKSSTGLSDSNNKPRSDNEFSEAINLFKTQRVKIGISLETLSKETKISRNVLI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEHHHHHHHHHCCCEEEE
AIENGWKKYLPEKTYLISMIKSLELKLNLEKGSLNGLSIQKDSINNVSKFKLNFINIDFL
EEECCHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCCEEEEEEEEEHHHH
NSWIGSLLYFIIMLLSILALNSQQKYLIQINSISTEPIKMEKTFMEDGNVINKAKEN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ALNFPFKKSSTGLSDSNNKPRSDNEFSEAINLFKTQRVKIGISLETLSKETKISRNVLI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEHHHHHHHHHCCCEEEE
AIENGWKKYLPEKTYLISMIKSLELKLNLEKGSLNGLSIQKDSINNVSKFKLNFINIDFL
EEECCHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCCEEEEEEEEEHHHH
NSWIGSLLYFIIMLLSILALNSQQKYLIQINSISTEPIKMEKTFMEDGNVINKAKEN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA