| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is srmB [H]
Identifier: 124026185
GI number: 124026185
Start: 1189779
End: 1191548
Strand: Direct
Name: srmB [H]
Synonym: NATL1_14791
Alternate gene names: 124026185
Gene position: 1189779-1191548 (Clockwise)
Preceding gene: 124026184
Following gene: 124026186
Centisome position: 63.8
GC content: 36.67
Gene sequence:
>1770_bases ATGACAAATAAAAATCCACATGAGGATTCCTCATGTCCAGTAGAACAAGATGTTCTCGAGGAATCTACTGAGGAAATATT AGAGGAAAGTGAGCAAAATTCAGAAAATGGATTTTCTGAATTTAATTTTAGTGAAGAACTAATTCAAACAATCTCTGATA AAGGCTACTCATCACCTACTCCGATTCAAAAAGCTGCAATTCCTGAATTGCTTCTTGGTAGAGATTTAGTTGGACAAGCT CAAACTGGTACAGGAAAAACCGCCGCATTTGCTTTACCAATACTAGAAAGGTTGAAAAAGAATGTTGGACATCCACAAGT TTTAGTTCTTGCTCCAACCCGCGAGTTGGCTATGCAAGTAGCTGAATCATTTCGAACATATTCGGCAGGTCATCCGCATT TTAAAGTGCTTGCAATATATGGAGGCTCTGATTTCCGAAATCAAATTAACACTCTCAGGAGGGGAGTCGATGTAGTCGTA GGGACTCCGGGGCGAGTCATGGATCACATGCGTCAAAAGACTCTAAATACTAGTCATCTGAGTTGTTTAGTTCTAGACGA GGCTGATGAGATGTTAAGGATGGGGTTTATTGATGACGTTGAGTGGATTTTAGAACAATTGCCAGAGGAGAGACAACTAG TTTTATTCTCAGCGACAATGCCATCTGAGATCAGAAGATTATCAAAAAAATATTTAAATAGCCCTGCAGAAATAACTATA AAAGCAACTGAATTGAAAGAAAGGCTTATAAGGCAAAGGTATATAAGCGTTCAAAATGTTTATAAAGTTAATGCACTTCA AAGAGTACTTGAAGCTGTATCAGAAGAAGGGGTAATAATATTTGCTAGAACAAAAGCCATAACAATCGTAGTAGCTGAAA AATTAGAATCATATGGATATAACGTAGCAGTTTTAAATGGAGATATTCCTCAAAATCAAAGGGAACGAACTGTTGAAAGA TTAAGACAAGGATCTATCAATATTTTAGTAGCTACAGATGTCGCAGCAAGAGGTCTTGATGTAGATCGAATTGGTTTAGT AATAAATTACGATATGCCATTTGATCGCGAAGCATATGTTCATAGAATTGGCAGAACAGGTCGTGCAGGAAGAAATGGTG AAGCAATTCTTTTTGTTAATCCTAGAGAAAGATCATTTTTAAGTAATCTTGAAAGAGCTGTAGGTCAGCCAATTGAAAAA ATGGATATTCCAGACAATGACCTTATAAACAATAACCGAATTAAGAAATTACAAGCAAAATTAATAAAAGCCGCCTCAAC AGAGAGAGACAACCCAGAAGAGGCTAACATTTTAGAAGAATTAATAAAAAATGTTGAAAAAGAATTAGATATAGATCCAA AAGACTTAACACTTGCCGCATTAAATTTGGCAGTTGGATTTAACGCACTCCTTGAGAATGGCAATGAGGATTGGATAAGA CAATCAGCTCAAAGGAATACAAGAAATGATCGCAGGGACAATAATAAATTCAAGCAACGTCGAAGAGGTGATTTTGATAA CAACAGACTTGAAGATGAAATGGACAGATTCAGGGTTGAAGTTGGGCACCGAGATAGAGTTAAGCCTGGAAATCTAGTTG GGGCAATTGCTAACGAGGCCGGACTAAAAGGGAGATCGATAGGAAGAATAAGAATATTTGAAAATTACAGCCTAGTAGAT CTCCCAAAACAAATGCCTGATAAAGTTTTCCAAGCTCTAAAGAAAGTCAAAGTAATGAATAGAGAGTTACAGATAAATAG AGCAGACTAA
Upstream 100 bases:
>100_bases AGATTATATCCCTTTAACAAGGCGAGTCAGCAAAGCACGGTTATACACCGATCGGAAGTTGTCTGCCTAATTTGAAGGAC AAAAAGGCAACCATTATTAG
Downstream 100 bases:
>100_bases AAGCACCAGAGATGCTCTATAAATTAATATTCAGCAGCATAATTACATTACTTATCTTAGAGATGAGTTACTCCTCAGAG ACTCAAGCAGAGCATAAAAA
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MTNKNPHEDSSCPVEQDVLEESTEEILEESEQNSENGFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQA QTGTGKTAAFALPILERLKKNVGHPQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDFRNQINTLRRGVDVVV GTPGRVMDHMRQKTLNTSHLSCLVLDEADEMLRMGFIDDVEWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITI KATELKERLIRQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGYNVAVLNGDIPQNQRERTVER LRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYVHRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEK MDIPDNDLINNNRIKKLQAKLIKAASTERDNPEEANILEELIKNVEKELDIDPKDLTLAALNLAVGFNALLENGNEDWIR QSAQRNTRNDRRDNNKFKQRRRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEAGLKGRSIGRIRIFENYSLVD LPKQMPDKVFQALKKVKVMNRELQINRAD
Sequences:
>Translated_589_residues MTNKNPHEDSSCPVEQDVLEESTEEILEESEQNSENGFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQA QTGTGKTAAFALPILERLKKNVGHPQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDFRNQINTLRRGVDVVV GTPGRVMDHMRQKTLNTSHLSCLVLDEADEMLRMGFIDDVEWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITI KATELKERLIRQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGYNVAVLNGDIPQNQRERTVER LRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYVHRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEK MDIPDNDLINNNRIKKLQAKLIKAASTERDNPEEANILEELIKNVEKELDIDPKDLTLAALNLAVGFNALLENGNEDWIR QSAQRNTRNDRRDNNKFKQRRRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEAGLKGRSIGRIRIFENYSLVD LPKQMPDKVFQALKKVKVMNRELQINRAD >Mature_588_residues TNKNPHEDSSCPVEQDVLEESTEEILEESEQNSENGFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQAQ TGTGKTAAFALPILERLKKNVGHPQVLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDFRNQINTLRRGVDVVVG TPGRVMDHMRQKTLNTSHLSCLVLDEADEMLRMGFIDDVEWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITIK ATELKERLIRQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGYNVAVLNGDIPQNQRERTVERL RQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYVHRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEKM DIPDNDLINNNRIKKLQAKLIKAASTERDNPEEANILEELIKNVEKELDIDPKDLTLAALNLAVGFNALLENGNEDWIRQ SAQRNTRNDRRDNNKFKQRRRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEAGLKGRSIGRIRIFENYSLVDL PKQMPDKVFQALKKVKVMNRELQINRAD
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=442, Percent_Identity=38.4615384615385, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI7661920, Length=392, Percent_Identity=37.7551020408163, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI50659095, Length=426, Percent_Identity=38.0281690140845, Blast_Score=268, Evalue=8e-72, Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=36.6834170854271, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI224593278, Length=470, Percent_Identity=33.6170212765957, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI20149629, Length=400, Percent_Identity=34.25, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4503529, Length=391, Percent_Identity=38.1074168797954, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI83700235, Length=389, Percent_Identity=38.0462724935733, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=37.7410468319559, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=37.7410468319559, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI31542656, Length=383, Percent_Identity=36.0313315926893, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=35.3099730458221, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=34.7701149425287, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=34.7701149425287, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI222352149, Length=344, Percent_Identity=39.2441860465116, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=38.031914893617, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=38.031914893617, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=37.2549019607843, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=37.2549019607843, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=38.8586956521739, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=37.2549019607843, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=38.8586956521739, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=38.8586956521739, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=37.2549019607843, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI148613856, Length=370, Percent_Identity=37.5675675675676, Blast_Score=230, Evalue=4e-60, Organism=Homo sapiens, GI38201710, Length=370, Percent_Identity=37.5675675675676, Blast_Score=230, Evalue=4e-60, Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=38.0165289256198, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI188035877, Length=360, Percent_Identity=34.7222222222222, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=37.9501385041551, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI41327773, Length=367, Percent_Identity=35.149863760218, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI21040371, Length=348, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=33.9285714285714, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=33.6734693877551, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=34.6368715083799, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI51094101, Length=400, Percent_Identity=32.25, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI164419743, Length=400, Percent_Identity=32.25, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=34.2318059299191, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI13514831, Length=410, Percent_Identity=32.1951219512195, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI62241024, Length=355, Percent_Identity=34.6478873239437, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI41327776, Length=400, Percent_Identity=31, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=32.3684210526316, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI164419732, Length=375, Percent_Identity=33.0666666666667, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI38327634, Length=369, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=29.8295454545455, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI38569505, Length=382, Percent_Identity=31.6753926701571, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=380, Percent_Identity=31.8421052631579, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=31.7617866004963, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=29.1169451073986, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.0650887573964, Blast_Score=150, Evalue=5e-36, Organism=Homo sapiens, GI256773275, Length=418, Percent_Identity=29.1866028708134, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI154759257, Length=433, Percent_Identity=28.6374133949192, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=36.1990950226244, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=30.0319488817891, Blast_Score=117, Evalue=3e-26, Organism=Escherichia coli, GI87082221, Length=557, Percent_Identity=44.3447037701975, Blast_Score=450, Evalue=1e-127, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=40.2144772117962, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1787605, Length=349, Percent_Identity=39.8280802292264, Blast_Score=261, Evalue=1e-70, Organism=Escherichia coli, GI1790214, Length=386, Percent_Identity=37.0466321243523, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=38.5915492957746, Blast_Score=238, Evalue=1e-63, Organism=Escherichia coli, GI48994977, Length=346, Percent_Identity=23.9884393063584, Blast_Score=69, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71987143, Length=410, Percent_Identity=38.780487804878, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17507121, Length=410, Percent_Identity=36.3414634146341, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI71995724, Length=373, Percent_Identity=37.5335120643432, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17555296, Length=379, Percent_Identity=37.2031662269129, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI32565321, Length=391, Percent_Identity=37.5959079283887, Blast_Score=254, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17510559, Length=553, Percent_Identity=32.1880650994575, Blast_Score=251, Evalue=5e-67, Organism=Caenorhabditis elegans, GI17552114, Length=381, Percent_Identity=34.1207349081365, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=37.8306878306878, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=37.5, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=37.8306878306878, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=37.8306878306878, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI86570094, Length=345, Percent_Identity=40.2898550724638, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17509811, Length=414, Percent_Identity=34.0579710144928, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17537549, Length=390, Percent_Identity=36.1538461538462, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17507945, Length=376, Percent_Identity=38.2978723404255, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552642, Length=361, Percent_Identity=37.6731301939058, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532548, Length=395, Percent_Identity=33.4177215189873, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI115532546, Length=396, Percent_Identity=33.3333333333333, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI115533224, Length=335, Percent_Identity=40, Blast_Score=218, Evalue=9e-57, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=32.5714285714286, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71999644, Length=381, Percent_Identity=30.1837270341207, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71999646, Length=378, Percent_Identity=30.1587301587302, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=32.183908045977, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507877, Length=380, Percent_Identity=32.8947368421053, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=33.7988826815642, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507879, Length=384, Percent_Identity=32.03125, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17536099, Length=405, Percent_Identity=32.8395061728395, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17536101, Length=405, Percent_Identity=32.8395061728395, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=31.8918918918919, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=33.0808080808081, Blast_Score=185, Evalue=7e-47, Organism=Caenorhabditis elegans, GI193208216, Length=400, Percent_Identity=32.25, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17505370, Length=387, Percent_Identity=32.0413436692506, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=27.8061224489796, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI25148203, Length=408, Percent_Identity=26.2254901960784, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507641, Length=417, Percent_Identity=29.7362110311751, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=396, Percent_Identity=30.050505050505, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI71990816, Length=357, Percent_Identity=31.3725490196078, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17556951, Length=396, Percent_Identity=26.2626262626263, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25148291, Length=372, Percent_Identity=27.9569892473118, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=34.6534653465347, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=26.2162162162162, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI25148205, Length=339, Percent_Identity=25.6637168141593, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=44.5454545454545, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17565430, Length=363, Percent_Identity=25.8953168044077, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17566630, Length=331, Percent_Identity=27.4924471299094, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=38.860103626943, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=36.6391184573003, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=34.5108695652174, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=38.8429752066116, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=38.0821917808219, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=38.0821917808219, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=37.9501385041551, Blast_Score=237, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=36.8279569892473, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=35.989010989011, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324620, Length=401, Percent_Identity=34.9127182044888, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=38.3333333333333, Blast_Score=224, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320173, Length=442, Percent_Identity=31.447963800905, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=417, Percent_Identity=32.1342925659472, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=32.5779036827195, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=388, Percent_Identity=31.1855670103093, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=353, Percent_Identity=34.8441926345609, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=429, Percent_Identity=31.7016317016317, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=362, Percent_Identity=33.4254143646409, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=372, Percent_Identity=30.9139784946237, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=383, Percent_Identity=31.5926892950392, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=357, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.1927710843373, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=28.3292978208232, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=428, Percent_Identity=27.1028037383178, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=376, Percent_Identity=26.8617021276596, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=427, Percent_Identity=22.0140515222482, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=37.8016085790885, Blast_Score=266, Evalue=4e-71, Organism=Drosophila melanogaster, GI24582080, Length=390, Percent_Identity=38.4615384615385, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24582078, Length=390, Percent_Identity=38.4615384615385, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI17136248, Length=390, Percent_Identity=38.4615384615385, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24582075, Length=390, Percent_Identity=38.4615384615385, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=38.8429752066116, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI24584994, Length=418, Percent_Identity=38.2775119617225, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=36.0215053763441, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=36.0215053763441, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI24662330, Length=363, Percent_Identity=38.2920110192837, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI18857967, Length=385, Percent_Identity=37.9220779220779, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=37.6770538243626, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=35.0828729281768, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=35.2459016393443, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=38.7005649717514, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI17977678, Length=398, Percent_Identity=37.6884422110553, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=410, Percent_Identity=34.390243902439, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI281361218, Length=410, Percent_Identity=34.390243902439, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644481, Length=410, Percent_Identity=34.390243902439, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644487, Length=410, Percent_Identity=34.390243902439, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551833, Length=410, Percent_Identity=34.390243902439, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644485, Length=410, Percent_Identity=34.390243902439, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644479, Length=410, Percent_Identity=34.390243902439, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI21356161, Length=470, Percent_Identity=33.6170212765957, Blast_Score=225, Evalue=7e-59, Organism=Drosophila melanogaster, GI17985987, Length=380, Percent_Identity=36.8421052631579, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=33.9031339031339, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=33.9031339031339, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=33.9031339031339, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI17136814, Length=367, Percent_Identity=35.4223433242507, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=34.4444444444444, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=34.4444444444444, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=31.0810810810811, Blast_Score=199, Evalue=6e-51, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.2179487179487, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=31.3888888888889, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI21355559, Length=401, Percent_Identity=33.6658354114713, Blast_Score=182, Evalue=8e-46, Organism=Drosophila melanogaster, GI24642822, Length=379, Percent_Identity=30.0791556728232, Blast_Score=176, Evalue=6e-44, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=30.5, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=33.972602739726, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI20130173, Length=484, Percent_Identity=26.4462809917355, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=28.2548476454294, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=28.4403669724771, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24640164, Length=360, Percent_Identity=26.9444444444444, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=34.010152284264, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=34.010152284264, Blast_Score=119, Evalue=8e-27, Organism=Drosophila melanogaster, GI17136666, Length=422, Percent_Identity=23.9336492890995, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 66770; Mature: 66639
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKNPHEDSSCPVEQDVLEESTEEILEESEQNSENGFSEFNFSEELIQTISDKGYSSPT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCC PIQKAAIPELLLGRDLVGQAQTGTGKTAAFALPILERLKKNVGHPQVLVLAPTRELAMQV CCHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH AESFRTYSAGHPHFKVLAIYGGSDFRNQINTLRRGVDVVVGTPGRVMDHMRQKTLNTSHL HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCE SCLVLDEADEMLRMGFIDDVEWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITI EEEEECCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEE KATELKERLIRQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGY EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHCCC NVAVLNGDIPQNQRERTVERLRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYV EEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCCEEHEEEEEECCCCCCHHHHH HRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEKMDIPDNDLINNNRIKKLQAK HHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH LIKAASTERDNPEEANILEELIKNVEKELDIDPKDLTLAALNLAVGFNALLENGNEDWIR HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QSAQRNTRNDRRDNNKFKQRRRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEA HHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHC GLKGRSIGRIRIFENYSLVDLPKQMPDKVFQALKKVKVMNRELQINRAD CCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCC >Mature Secondary Structure TNKNPHEDSSCPVEQDVLEESTEEILEESEQNSENGFSEFNFSEELIQTISDKGYSSPT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCC PIQKAAIPELLLGRDLVGQAQTGTGKTAAFALPILERLKKNVGHPQVLVLAPTRELAMQV CCHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH AESFRTYSAGHPHFKVLAIYGGSDFRNQINTLRRGVDVVVGTPGRVMDHMRQKTLNTSHL HHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCE SCLVLDEADEMLRMGFIDDVEWILEQLPEERQLVLFSATMPSEIRRLSKKYLNSPAEITI EEEEECCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEE KATELKERLIRQRYISVQNVYKVNALQRVLEAVSEEGVIIFARTKAITIVVAEKLESYGY EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHCCC NVAVLNGDIPQNQRERTVERLRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYV EEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCCEEHEEEEEECCCCCCHHHHH HRIGRTGRAGRNGEAILFVNPRERSFLSNLERAVGQPIEKMDIPDNDLINNNRIKKLQAK HHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH LIKAASTERDNPEEANILEELIKNVEKELDIDPKDLTLAALNLAVGFNALLENGNEDWIR HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QSAQRNTRNDRRDNNKFKQRRRGDFDNNRLEDEMDRFRVEVGHRDRVKPGNLVGAIANEA HHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHC GLKGRSIGRIRIFENYSLVDLPKQMPDKVFQALKKVKVMNRELQINRAD CCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]