| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026145
Identifier: 124026145
GI number: 124026145
Start: 1160149
End: 1160415
Strand: Reverse
Name: 124026145
Synonym: NATL1_14381
Alternate gene names: NA
Gene position: 1160415-1160149 (Counterclockwise)
Preceding gene: 124026147
Following gene: 124026144
Centisome position: 62.23
GC content: 25.09
Gene sequence:
>267_bases ATGAGTAATTTTAACGATTTTCAAAAAATGATAAAAAATTTGAATGATGAAAAATTATCAGAACTTTGTGAAGAATTCCT TACCAATCATGAGGCTGCGATGAATATATTGTTTAAATATTGTAGTGAATTTGGATTAATATTTGATAGCCAAGAAATTA AAGATAACATGACAATTATGCATAAGAATGGCGACTTTGATAATATTGTATGTTTTGGGATTGAATTATCAGAAAATCAA TTATATAAAAAGTTTCATCCTTCTTGA
Upstream 100 bases:
>100_bases ACACTTCTGTGGTTTTTTTATTACATCCTAAAGCAATATTTGTTATGACGAGATTATTAAAAAAAGTTATGAATAGATAA CTTCGACTTCTAAAAATTAA
Downstream 100 bases:
>100_bases ATAGTTTTCGGACATTTTAAAATGCTGATTTGCCTTTACCTGATCTAAGAAGAAATAAAGTAGGCAATGCTAATAGAACT GTTACTGAAGTAATGAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSNFNDFQKMIKNLNDEKLSELCEEFLTNHEAAMNILFKYCSEFGLIFDSQEIKDNMTIMHKNGDFDNIVCFGIELSENQ LYKKFHPS
Sequences:
>Translated_88_residues MSNFNDFQKMIKNLNDEKLSELCEEFLTNHEAAMNILFKYCSEFGLIFDSQEIKDNMTIMHKNGDFDNIVCFGIELSENQ LYKKFHPS >Mature_87_residues SNFNDFQKMIKNLNDEKLSELCEEFLTNHEAAMNILFKYCSEFGLIFDSQEIKDNMTIMHKNGDFDNIVCFGIELSENQL YKKFHPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10381; Mature: 10250
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFNDFQKMIKNLNDEKLSELCEEFLTNHEAAMNILFKYCSEFGLIFDSQEIKDNMTIM CCCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEE HKNGDFDNIVCFGIELSENQLYKKFHPS ECCCCCCCEEEEEEEECCHHHHHHCCCC >Mature Secondary Structure SNFNDFQKMIKNLNDEKLSELCEEFLTNHEAAMNILFKYCSEFGLIFDSQEIKDNMTIM CCHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEE HKNGDFDNIVCFGIELSENQLYKKFHPS ECCCCCCCEEEEEEEECCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA